Hi -  
trac-all completed in all my Ps except one
and I noticed that the  dlabel/diff output does not contain all the files

I assessed whether it could be do to poor registration, by checking
the  aparc+aseg
file and looks allright

I also checked the registration of FA maps to standard space by 
freeview -v $FSLDIR/data/standard/MNI152_T1_1mm_brain.nii.gz dtifit_FA.bbr.nii.gz 
and seems fine

also

freeview -v brain_anat_orig.nii.gz lowb_brain.nii.gz 

which also seems fine

any ideas pls?

thanks!

ds



On Fri, Aug 16, 2013 at 5:14 PM, Anastasia Yendiki <ayendiki@nmr.mgh.harvard.edu> wrote:
 
I suspect the current problem is caused by poor registration. Have you checked the aparc+aseg and/or the registration from diffusion to anatomical and from anatomical to MNI?


On Fri, 16 Aug 2013, David Soto wrote: 


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