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Hello,

My name is Faizan Anwar. I am currently a undergraduate student at UCLA. I had two questions regarding freesurfer:

  • Is FSAVERAGE file a universal template that could be used with any set of subject data, or is it a specific file created during recon all. If yes, how can I recreate fsaverage file with a freesurfer processed dataset (i.e. recon all was already done on this dataset and I have moved the FS data to a different computer without the FSAVERAGE file
  • Also, I wanted to ask if there is a way to extract LabelROI of multiple subject at the same time alike aseg2stats command? and If there is a way to do a group analysis  and visualize the difference within that specific region?
Any assistance in these two questions would be extremely helpful. Looking forward to your reply

 
Thank you,

Sincerely,
Faizan Anwar