External Email - Use Caution

Hello,

I have attached the log file and the command used is the first line, please let me know if you need anything else.

-Colleen

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Zollei, Lilla,Ph.D. <LZOLLEI@mgh.harvard.edu>
Sent: Tuesday, April 13, 2021 12:33 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error

Hi Colleen,

Can you send the exact command that you used and also the log file for more information?

Best, Lilla

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of COLLEEN PLETCHER <ccpletcher@medicine.wisc.edu>
Sent: Tuesday, April 13, 2021 1:29 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Infant Freesurfer exiting without error

External Email - Use Caution

Hi,

I am trying to run infant freesurfer using the --segfile and --masked options. When I attempt to run it, it runs for a bit and then I get this:

USAGE: mri_or <options> fname1 fname2 ..

After this, the program exits. I am not getting any error, so I am confused about why it is exiting suddenly?

Thank you very much!

-Colleen