Hi Erik

yes, you can apply mri_extract_label to the aparc+aseg.mgz to extract EC
as a volume mask

cheers
Bruce
On Tue, 12 Jun 2018, Erik O'Hanlon wrote:

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> Hi FS experts ,
>
>
> I'd like to make masks for the entorhinal cortex to use for tractography. Can you advise what FS tool should be used? I've used the mri_extract_label for my hippocampal masks but not sure what files to use to extract EC ? I'm sure it's straightforward
>
>
> Thanks for any advice
>
>
> Best regards
>
>
> Erik
>
> Erik O'Hanlon
> Postdoctoral researcher
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