Hi Anastasia,
I have put T1 in /Applications/freesurfer/subjects/subject_prova/Diff01/ together data.nii.gz, bvals and bvecs.
My $SUBJECTS_DIR=$FREESURFER_HOME/subjects/subject_prova
T1 was called as T1_01.nii.gz.
This is well done?
Thanks,
Stefano
----Messaggio originale----
Da: ayendiki@nmr.mgh.harvard.edu
Data: 3-feb-2013 20.50
A: <stdp82@virgilio.it>
Cc: <freesurfer@nmr.mgh.harvard.edu>
Ogg: Re: [Freesurfer] tracula bvecs error
Do you have a freesurfer recon of your subject's T1 in the $SUBJECTS_DIR?
On Sun, 3 Feb 2013, stdp82@virgilio.it wrote:
> I think that I have resolved the bvecs error by using sudo nano option but
> now in the next step I visualize this error:
> ERROR: fio_pushd:
> /Applications/freesurfer/subjects/subject_prova/Diff01/dlabel/mni
> ERROR: must specify brain mask volume for output subject
>
> Thanks,
>
> Stefano
>
>
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