Hi,
I am accessing my subject directory on a network attached drive. When I run mri glmfit it segfaults. However, it works if the subject directory is on my own computer. Do you have any way to do this with the subject directory on the network drive?
Below is a sample output.
Thanks,
Allie
Caduceus:~/ammonis/fsSubjects/subjects_archive> mri_glmfit --y lh.smoothed.thickness.6.mgz --fsgd GDF1.txt doss --glmdir lh.smoothed.thickness.6.glmdir --surf fsaverage lh --C ContrastAge.txt
gdfReadHeader: reading GDF1.txt
INFO: DeMeanFlag keyword not found, DeMeaning will NOT be done.
Continuous Variable Means (all subjects)
0 Age 40.0625
1 PCS 9.875
2 Neuro 17.8125
3 Extro 30
4 Open 28.875
5 Agree 32.4375
6 Consc 34.625
Class Means of each Continuous Variable
1 Control 40.0625 9.8750 17.8125 30.0000 28.8750 32.4375 34.6250
INFO: gd2mtx_method is doss
Reading source surface /media/AMMONIS/fsSubjects/subjects_archive/fsaverage/surf/lh.white
reading group avg surface area 822 cm^2 from file
Reading in average area /media/AMMONIS/fsSubjects/subjects_archive/fsaverage/surf/lh.white.avg.area.mgh
Number of vertices 163842
Number of faces 327680
Total area 65416.648438
AvgVtxArea 0.399267
AvgVtxDist 0.721953
StdVtxDist 0.195470
$Id: mri_glmfit.c,v 1.138.2.15 2009/07/27 17:43:10 greve Exp $
cwd /media/AMMONIS/fsSubjects/subjects_archive
cmdline mri_glmfit --y lh.smoothed.thickness.6.mgz --fsgd GDF1.txt doss --glmdir lh.smoothed.thickness.6.glmdir --surf fsaverage lh --C ContrastAge.txt
sysname Linux
hostname Caduceus
machine x86_64
user arosen
FixVertexAreaFlag = 1
UseMaskWithSmoothing 1
OneSampleGroupMean 0
y /media/AMMONIS/fsSubjects/subjects_archive/lh.smoothed.thickness.6.mgz
logyflag 0
usedti 0
FSGD GDF1.txt
glmdir lh.smoothed.thickness.6.glmdir
IllCondOK 0
DoFFx 0
Creating output directory lh.smoothed.thickness.6.glmdir
Segmentation fault