Yes, single group just means a single class in the FSGD file. Then just include your clinical measure as a variable in the FSGD

On 2/14/2022 11:39 AM, Koustav Chatterjee wrote:

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Thanks. 

I am afraid since I am working on a single group ( only patient group), can I run the same? 

On Mon, 14 Feb, 2022, 9:51 pm Douglas N. Greve, <dgreve@mgh.harvard.edu> wrote:

You can run a group analysis
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One of the outputs will be the correlation (along with the sig of the correlation)

On 2/13/2022 6:35 PM, Koustav Chatterjee wrote:

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Dear FreeSurfer experts,

I am trying to find the correlation between the regional cortical thickness and volume with different clinical measures of a neurodegenerative condition. I am using DK atlas to get the cortical measures and establish the correlation using SPSS, a statistical software. 

But, I would like to get FreeSurfer developed images. I would like to learn how to get the areas through images (the FreeSurfer pipeline generated images showing brain regions associated with clinical measures I am interested in). 

Looking for your kind help. 

Regards,

KC

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