Is the image in the wrong orientation (ie, is it not truly in PIR) or do you want to change the orientation? doing a left-right swap is more than changing the orientation

On 2/11/2020 4:06 PM, Miguel Ángel Rivas Fernández wrote:

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Dear Freesurfer experts,

Which command should I use to flip the left-right orientation of a T1 image?. Actually my image is in PIR orientation, I used the following command

mri_info --orientation '/home/rmn/Desktop/study/E03/3d/coanat_E03.nii'

PIR

Thanks in advance,

Best regards,

--

Miguel Ángel Rivas Fernández
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