Fri Aug 9 13:04:49 BST 2013 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/diffree /usr/local/freesurfer/bin/trac-all -c traculatest.txt -bedp -log trac_from_fsleddy_bedp Subject 02ST SUBJECTS_DIR /home/dsoto/Documents/fmri/rsdtianawmgui FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0 dsoto wmen-dsoto3 Linux wmen-dsoto3 3.2.0-49-generic #75-Ubuntu SMP Tue Jun 18 17:39:32 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 514727 maxlocks unlimited maxsignal 514727 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buffers cached Mem: 65903240 23049180 42854060 0 582796 18096740 -/+ buffers/cache: 4369644 61533596 Swap: 67032060 941640 66090420 ######################################## Program versions: $Id: trac-all,v 1.22.2.12 2013/02/23 02:01:02 ayendiki Exp $ mri_convert --all-info ProgramName: mri_convert ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/09-12:04:49-GMT BuildTimeStamp: May 13 2013 18:45:07 CVS: $Id: mri_convert.c,v 1.179.2.7 2012/09/05 21:55:16 mreuter Exp $ User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 FLIRT version 6.0 $Id: bbregister,v 1.49.2.3 2013/03/25 18:04:53 greve Exp $ $Id: mri_cvs_register,v 1.15.2.12 2013/02/09 00:37:37 nicks Exp $ ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/09-12:04:49-GMT BuildTimeStamp: May 13 2013 18:45:07 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/09-12:04:49-GMT BuildTimeStamp: May 13 2013 18:45:07 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/09-12:04:49-GMT BuildTimeStamp: May 13 2013 18:45:07 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable5 $ TimeStamp: 2013/08/09-12:04:49-GMT BuildTimeStamp: May 13 2013 18:45:07 CVS: User: dsoto Machine: wmen-dsoto3 Platform: Linux PlatformVersion: 3.2.0-49-generic CompilerName: GCC CompilerVersion: 30400 WARN: Running FSL's bedbost locally - this might take a while WARN: It is recommended to run this step on a cluster bedpostx_mgh -n 2 /home/dsoto/Documents/fmri/rsdtianawmgui/02ST/dmri /usr/local/freesurfer/bin/bedpostx_mgh: 131: /usr/local/freesurfer/bin/bedpostx_mgh: Syntax error: "(" unexpected