It’s there:
licence.txt located in: /Applications/freesurfer/7.4.0/license.txt (can be read, as recon-all works)
Or do you mean /Applications/freesurfer/license.txt?
Von: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> Im Auftrag von Wang, Ruopeng
Gesendet: Freitag, 3. Januar 2025 16:58
An: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Betreff: Re: [Freesurfer] [ext] Re: Freeview crash
To run as an app bundle, since there is no global environment settings, you need to put the license file in /Applications/freesurfer folder. Then you should be able to load data.
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Yes, I’ve tried that as well. Freeview opens as an app bundle, but it crashes when I load a file. Interestingly, this is inconsistent—sometimes I can load a file without any issues, but most of the time, it crashes in the same way.
I’ve this problem on two different Macs:
- System 1: macOS Sonoma 14.5 with FreeSurfer 7.3.2.
- System 2: macOS Sonoma 14.7.1 with FreeSurfer 7.4.0.
Have you tried running freeview as an app bundle? Or can you try running freeview directly from the binary location? Like this:
$FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview
When I want to open files with freeview, it crashes immediately. I tried my own recon-all output and the bert dataset. Can you help me?
Operating system: Mac, Sonoma 14.7.1
licence.txt located in: /Applications/freesurfer/7.4.0/license.txt (can be read, as recon-all works)
environment is set by FREESURFER_HOME=/Applications/freesurfer/7.4.0 and source $FREESURFER_HOME/SetUpFreeSurfer.sh
When I run the command freeview, the following message is given:
/Applications/freesurfer/7.4.0/bin/freeview: line 2: 6615 Segmentation fault: 11 $FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview "$@"
Or trying to open a file:
freeview -v /Users/annatietze/Documents/freesurfer/freesurfer_subjects/nini_ra/mri/orig/001.mgz
/Applications/freesurfer/7.4.0/bin/freeview: line 2: 6765 Segmentation fault: 11 $FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview "$@"
freeview -v /Applications/freesurfer/7.4.0/subjects/bert/mri/orig/001.mgz
/Applications/freesurfer/7.4.0/bin/freeview: line 2: 6799 Segmentation fault: 11 $FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview "$@"
Attached is a detailed error report.
What did I overlook?? Thank you so much for help!
<problem report freeview.rtf>
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