Hi,

I have a problem when executing the following command on images scanned on 1.5T Philips (Intera) in FS 6.0:

recon-all -i 0e242a36-5390-4358-9f92-eb9f62c48124/ADNI_032_S_0187_MR____________MPRAGE__br_raw_20060213164320687_1_S11617_I11073.dcm -subjid 4450a7a0-27e9-42bc-99ab-1c15519ad9a4 -all -mprage -qcache -hippocampal-subfields-T1 -brainstem-structures -cw256

which during mri_convert produces the error:

ERROR: GetDICOMInfo(): dcmGetDWIParams() 7

DICOMs from other scanners works fine as far as we know. When processing them through 5.3.0 we didn't get any errors like this, regardless of scanner If we just copy the mri_convert binary file from FS 5.3.0 to FS 6.0 the errors disappears. Would this be the recommend approach to solve our issues?

We are running on Ubuntu 16.04 LTS with FS version freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c. I've included recon-all.log case it is of interest.

Thank you for your help!

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Gustav Mårtensson | PhD student
Division of Clinical Geriatrics
Department of Neurobiology, Care Sciences and Society
Karolinska Institutet