Hi Maheen,

I have been using SIMNIBS (www.simnibs.de) script for the exact same thing. This script gives a mesh output. 

Perhaps that helps,..

Kind regards,
Jesu

Jesu Kiran Spurgen
Postgraduate Student in Advanced Medical Imaging
KU Leuven, Belgium

On Fri, Feb 5, 2016 at 1:29 PM, Maheen Siddiqui <maheen.siddiqui91@gmail.com> wrote:

Dear FreeSurfer Users, 


I have been using the recon-all FreeSurfer command to reconstruct surfaces from T1 weighted MRI scan. I need to import the surfaces I have into Homer2 Atlas Viewer and for this I need whole surface/volume files rather than the individual hemispheres. Does anybody have experience combining the hemispheres?


Many thanks,


Maheen 


Maheen Siddiqui

 

BBSRC LIDo PhD Student 

Centre for Brain and Cognitive Development

Birkbeck, University of London

London



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