You should not need to. The files with the string .FSvoxelSpace in them should already be in that space

On 5/10/2021 5:32 AM, Borghi, G. (Gregorio) wrote:

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Dear All,

Due to my study, I have been unsuccessfully trying to co-register the hippocampal and amygdala segmented file (obtained from segmentHA_T2.sh) to my T1-weighted anatomical image (.nii), so that I can use the segmented file as a mask for later ROI analysis. However, despite trying in several ways with mri_robust_register and tkregister2, I have not been able to coregister the 2 together. Any suggestions?

Kind regards,
Greg

s1034199
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