You can use mri_convert, like

mri_convert lh.thickness --ascii lh.thickness.txt

this will create a text file with a single column, one row for each
vertex. You can also use


mri_convert lh.thickness --ascii+crsf lh.thickness.txt

This will create 5 columns, the first being the column number, then row
number, then slice number, then frame number, then thickness value. In
this case, the column number will be the vertex number, and the row,
slice, and frame will always be 0.



On 05/29/2016 12:19 PM, Francesco Cardinale wrote:

Dear Freesurfer experts,

I would like to make some algebraic operations with scalars, such as

?h.thickness or sig.mgh. They are referred to the same surface, of course.

How can I export the thickness values to a spreadsheet? (?h.thickness

2 table)

How can I export the significance values to a spreadsheet? (sig.mgh 2

table)

All my best

Cico

Francesco Cardinale, MD

Neurosurgeon

"Claudio Munari" Centre for Epilepsy and Parkinson Surgery - Ospedale

Niguarda "Ca' Granda"

Piazza dell'Ospedale Maggiore, 3 - 20162 - Milano - Italia

<x-apple-data-detectors://0/0>

phone 0039 02 64442917 <tel:0039%2002%2064442917>

fax 0039 02 64442868 <tel:0039%2002%2064442868>

e-mail francesco.cardinale@ospedaleniguarda.it

<mailto:francesco.cardinale@ospedaleniguarda.it>

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