External Email - Use Caution

That's weird. In the echo below, is that from your shell or on the HCP? When you source the FS environment, that variable will be set.

On 5/12/2023 5:33 AM, Krystal Xiwing Yau wrote:

External Email - Use Caution
Dear FreeSurfer expoerts,

I am running recon-all for the subject on a HPC. It exited with error when talairach was running - it indicated "MINC_BIN_DIR: Undefined variable". The log file is attached to this email.

I tried to look up the directory, which contains MINC_BIN_DIR as indicated on the forum . When I type the command, there was none:

echo $MINC_BIN_DIR

Any advise would be highly appreciated. Lots of thanks.

Regards,
Krystal

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