Hello,

I am trying to use bbrestier to take an .annot file of a particular structure and register it to MNI space. I want to be able to use one of the FreeSurfer parcellations of the ACC (lh.caudalanteriorcingulate.label) and do a fMRI BOLD extraction in FSL in MNI space. Below is the command I used and the error message I am getting. Please let me know if what I am doing makes any sense or if I am way off base.

Input

bbregister --s fsaverage --mov /u/home/n/nhutche/temp/labels/lh.caudalanteriorcingulate.label --t1 --init-fsl --reg register.dat

 Output

mkdir: cannot create directory `./tmp.bbregister.6489': Permission denied

Log file is register.dat.log

register.dat.log: Permission denied.

Take care,
Dr. Nathan Hutcheson

Postdoctoral Researcher 

University of California Los Angeles

Semel Institute 

760 Westwood Plaza C8-202

Los Angeles, CA 90024

T: 770.841.1694

nathanhutcheson.com 

 

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