Hi Freesurfers,

 

What’s the best way to resample recon data such as aparc+aseg.mgz into scanner space for recons with multiple T1s?  Right now I’m using mri_vol2vol with –regheader to resample from orig space to rawavg, then using mri_vol2vol again with the 001.lta, 002.lta etc. registration matrices to get it back to the original scanner space for each T1.  Is there a way to do this without two interpolation steps?

 

Thanks,

jared