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Hi Bruce,

Thanks for your help!
I got the label after running mri_annotation2label using the label\lh.aparc.annot file on an individual subject. I always assumed (maybe wrongly) that labels correspond to surfaces and are defined in freesurfer's conformed space.

Best regards,
Sam


On Fri, Jun 3, 2022 at 4:33 PM Fischl, Bruce <BFISCHL@mgh.harvard.edu> wrote:

Hi Sam

 

We need more information. What do you mean by “freesurfer space”? Is it on an individual subject or fsaverage? Volume or surface? How did you create it?

 

Cheers

Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Sam W
Sent: Friday, June 3, 2022 9:12 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] labels in anatomical space

 

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Hello!

I have a label in freesurfer space, and I would like it to be in anatomical space. Is this possible?

Best regards,

Sam

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