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Please, could you check the command line.

I suspect that an error is there.

Thanks.

Stefano

mri_binarize --i ThalamicNuclei.v10.T1.mgz --replace-only 8130 8133 --o Left-Ventroposterior.mgz

Il 30 aprile 2020 alle 18.51 "Douglas N. Greve" <dgreve@mgh.harvard.edu> ha scritto:

You can use mri_binarize --i ThalamicNuclei.v10.T1.mgz --replace-only segid segidreplace ... --o newseg.mgz
to create a new segmentation with merged segments, then using vol2subfield with the newseg seg as --sf

On 4/29/2020 7:57 PM, stdp82@virgilio.it wrote:
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Hi list,

vol2subfield --i fmcpr.nii.gz --reg register.dof6.lta --sf ThalamicNuclei.v10.T1.mgz --stats stats.dat --avgwf avgwf.dat --avgwfvol avgwfvol.mgz --o f2subf.nii.gz

extracts the time course from each thalamic subregions.

If I would like to merge multiple regions (e.g. --id 8115 --id 8116) and extract a single time course from them, which is the way?

Thanks

Stefano
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