Hi,

Suppose the fsid of your subj10 is subj10 and you set SUBJECTS_DIR correctly to /home/team33/MRI4,

the command should be

aparcstats2table --hemi lh --subjects subj10 --parc aparc.a2009s --meas meancurv --tablefile /home/team33/aparcstats.txt

I noticed that there is a space between team33/ and aparcstats.txt, which will cause another problem.

Hope this helps,

Kiyotaka

2020/11/5 0:24 saman fouladi <smnfouladi@yahoo.com>:

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hi

I run in linux command:
"""""""""""""""""""""""""""""""""""""""""""
aparcstats2table --hemi lh --subjects /home/team33/MRI4/subj10/stats --parc aparc.a2009s --meas meancurv --tablefile /home/team33/ aparcstats.txt
"""""""""""""""""""""""""""""""""""""""""""
but show below error an i can not solve it nix:

"""""""""""""""""""""""""""""""""""""""""""
File "/usr/local/freesurfer/bin/aparcstats2table", line 156
print 'ERROR: atleast 1 subject must be provided'
"""""""""""""""""""""""""""""""""""""""""""

I changed the code several times, but in all cases there is this error.
This error also happens to asegstats2table.

please help me

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Kiyotaka Nemoto, M.D., Ph.D.
Associate Professor
Department of Psychiatry
Division of Clinical Medicine, Faculty of Medicine
University of Tsukuba
1-1-1Tennodai Tsukuba, Ibaraki 305-8575, Japan
E-mail: kiyotaka@nemotos.net