On Tue, Jul 7, 2009 at 12:36 AM, Douglas N Greve <greve@nmr.mgh.harvard.edu> wrote:

It just takes the log of the input and constructs a design matrix from your bvals and bvecs, then fits a glm.

doug

?? wrote:

Hi, All.
The related item of "Fitting Tensors" is listed from the dt_recon.

# Fit tensors
echo "#@#-------------------------------" | tee -a $LF
echo "Fitting Tensors" | tee -a $LF
date | tee -a $LF

set cmd = (mri_glmfit --y $fec --glmdir $OutDir);
if($#bvals == 0) then
set cmd = ($cmd --dti $infodump)
else
set cmd = ($cmd --dti $bvals $bvecs)
endif

However, I can't find any description about this argument(--dti) in mri_glmfit. Did the mri_glmfit call the dtifit to fit the tensor from fsl?If not, what is it?

--
Albert
Lab of Complex System and Artificial Intelligence,
Institute of Automation,Chinese Academy of Sciences(CASIA)
Beijing, 100190,P.R.CHINA

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Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
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