On 9/23/2020 10:23 AM, Annelies Vant Westeinde wrote:

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Hello list,

I noticed that I find the quality of the neocortical segmentation of vs 6 better than vs 7.1.1., but the subcortical segmentation of 7.1.1 better than vs 6.
Can you send a few examples?

Is it valid to do analyses of neocortical and subcortical areas based on different Freesurfer versions? Even when, say, correlating them to each other? Or, in line with this to use the hippocampal and amygdala subfields from vs 7.1.1 in combination with neocortex (eg thickness estimates) of vs 6?
I think it is ok, though you may run into some pushback from reviewers as it is non-standard.

Thank you!

Annelies

Annelies van't Westeinde | PHD Candidate
Department of Women's and Children's Health | Karolinska Institutet
171 77 Solna | Karolinskavägen 37A
+46 760967499
annelies.vant.westeinde@ki.se ki.se
______________________________________
Karolinska Institutet – a medical university



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