Hi All,

I’m trying to see how much my thickness measures are affected by my manual edits.

When I tried to use the –clean-bm flag with autorecon2 I always got this message:

-1): read error

mri_em_register: could not open mask volume brainmask.mgz.

It seems to me that this flag delete the brainmask.mgz file but doesn’t generate a new copy of this file from the brainmask.auto.mgz file.

Could you help me with that?

Thank you in advance,

Antonio

Antonio Gallo, MD

NIB-NINDS-NIH

10 Center Drive

Building 10, Room 5B16

Bethesda, MD, 20892 - USA

ph #: 001-301-402.6391

fax #: 001-301-402.0373

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