Looks like we can't read the dicom fully. Is this a standard ct produced by the scanner? I guess I would try some other conversion utility like mricro to convert to nifti



On Apr 4, 2011, at 5:16 PM, "Andrew R. Dykstra" <adykstra@mit.edu> wrote:

Hi Bruce,

Here is the output from mri_info on both the mgz volume and dicom series.

Cheers,
Andy



On Mon, Apr 4, 2011 at 11:08 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
Hi Andy

can you run mri_info on the volume and see what it thinks the voxel dimensions are? Then also run it on the dicom series?

cheers
Bruce



On Fri, 1 Apr 2011, Andrew R. Dykstra wrote:

Hi all,

I'm having problems either or converting a series of dicoms from a CT scan
obtained at MGH main.  When viewing them in the standard hospital viewer,
they appear normal, but when viewing them in TKMEDIT (either the original
dicom series or converted mgz file), the scaling changes.  Are there any
options in mri_convert I can use to overcome this problem?  See attached
view of the mgz file.

Cheers,
Andy



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Andrew R. Dykstra
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