The thicknesses are stored in the ?h.thickness file. You can use read_curv.m to load it into matlab or use mri_convert to convert it to nifti.
doug

On 8/5/13 5:28 AM, Muhammad Naveed Iqbal Qureshi wrote:

Dear Community,

I need to know how can I read the numeric cortical thickness values from freesurfer processed files. (as there are too many in the surf folder)

Thank you.

Best Regards

Naveed
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer