Dear Freesurfer,
Using Freesurfer version 7.1, I was running recon-all on 13 subjects, using the command below
ls *.nii | parallel -jobs 8 recon-all -s {.} -I {} -all –qcache
(also checked with this one find . -name '*.nii' | parallel -j 8 recon-all -s {.} -i {} -all -qcache)
but each time i face the same error as attached with the mail.
I checked the transformation folder, but the said file, talairach.m3z, is not there.
the error is not same for all cases, some cases showed a different errors, stating "IFLAG= -1 LINE SEARCH FAILED. SEE DOCUMENTATION OF ROUTINE MCSRCH ERROR RETURN OF LINE SEARCH:" as attached file recon-all(2nd type).log
Regards