Dear Arkadiy
Andrew Hoopes just pinpointed that they have tracked down these warnings to a recent code change. It’s happening for everyone using dev. You can ignore these znz error statements, they are completely innocuous.
It’s just caused by a print statement that shouldn’t have been added.
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Translational Imaging Group
University College London
http://www.jeiglesias.com
http://cmictig.cs.ucl.ac.uk/
From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of "Maksimovskiy, Arkadiy" <AMAKSIMOVSKIY@mclean.harvard.edu>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Tuesday, 24 October 2017 at 14:31
To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] segmentHA znzread failed error
Dear Hipp. Segmentation experts,
I keep getting the following error when running the segmentHA script from the Dev. Version. Wondering if this is serious or something that can be ignored, as the process keeps running to the end:
Transforming points
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
threshold mask volume at 0.5
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
No such file or directory
threshold mask volume at 0.5
znzreadInt: znzread failed
No such file or directory
znzreadInt: znzread failed
Thank you for your help,
Arkadiy
--
Arkadiy L. Maksimovskiy, Ph.D.
Postdoctoral Research Fellow
McLean Imaging Center, McLean Hospital
Department of Psychiatry, Harvard Medical School