Hi, I have a script that basically opens up tksurfer and tkmedit for manual editing, and then runs recon-all stage2 once you’re done editing. We recently tried to run the script on a different computer with the same freesurfer distribution, and got an error I’m not used to seeing.

 

It says:

 

WARNING: Couldn't not load orig volume from /????//surf/../mri/orig.mgz

         Talairach coords will be incorrect.

 

(the ‘????’ was edited in by me)

 

I was just wondering if this error will create problems, either with correct manual editing or with running stage2. Thanks,

 

-Aaron-

 

 

Aaron L. Goldman

Post-Bacc IRTA

Genes, Cognition and Psychosis Program, NIMH

Building 10, Room 3C108

Phone: (301) 435-0944

Email: aarong@mail.nih.gov