Before viewing it on the surface, you should view it in the volume with tkmedit. You can also load the surfaces in the volume (they show up as lines), and see if the surfaces intersect the activatino. Also, please remember to provide us with all the relevant info. See surfer.nmr.mgh.harvard.edu/fswiki/BugReporting for suggestions.

doug

Wang, Xin wrote:

I attach the pictures of same fsl cluster in mricro and freesurfer surface. They are quite different. I manually checked registration in tkregister2, and felt it is registed well.

Any suggestion is highly appreciated.

Xin

From: Wang, Xin
Sent: Thu 8/28/2008 9:12 AM
To: freesurfer
Subject: [Freesurfer] fsl ROIs become smaller after registered to freesurfer

Hello, Group,

I tried to registered the fsl average of one subject .gfeat to his freesurfer surface. After manual correction of register files, the ROIs of ,gfeat become much smaller on the freesufer surface (including less cortical areas). please help me with this problem.

Thank in advance,

Xin
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358 
Fax: 617-726-7422

In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting