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Oh, Good to know!On Nov 17, 2023, at 3:04 PM, Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:
You can't put math or brackets in the contrast file. Just use
.333 .333 .333 -.333 -.333 -.333 0 0 0 0
On 11/16/2023 10:50 AM, Ludmila Midrigan wrote:
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Dear Douglas, thank you for the reply.I am attaching it here. I usually create it (using BASH) as such: << echo “1 -1” > File_Name.mtx and have never had issues, however I have not used "[ ] " on my contrasts before...Thank you so so much for your willingness to help and your time!
On Wed, Nov 15, 2023 at 6:47 PM Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:
Can you send /data/Ghana_MRI_Data_lmid/StructT1/subjDir_FS_GHANA/Contrasts/GM_FM_ONE_minus_ZERO.mtx ?_______________________________________________
How did you create this file? A lot of word processors will add special characters that can cause a read failure.
On 11/9/2023 12:33 PM, Ludmila Midrigan wrote:
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Hi Douglas,Thank you for your reply.Yes, find attached the fsgd file, the contrast is [1 1 1 -1 -1 -1 0 0 0 0]/3As well as the code I am running and the whole output from the terminal.
Thank you so much for your help!
On Thu, Nov 9, 2023 at 6:35 AM Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:
Can you send the command line, all the terminal output, and your fsgd file?_______________________________________________
On 11/3/2023 11:51 AM, Ludmila Midrigan wrote:
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Hi dear FS experts,I am having issues with ( I am assuming) the design matrix for my GM analysis.I am getting the error:
"error: MatrixReadTxT: could not scan value [1][1]
ERROR: loading C Path_to_contrast"
I am only interested in a difference for Group ONE - Group ZERO;I am trying to run a DOSS ( with three groups and 4 nuisance covariates)my contrast is :[1 1 1 -1 -1 -1 0 0 0 0]/3
I have standardized all variables.Attached is the FSGD.xlxs file ( that I did transform into a .fsgd file)Please let me know what I'm doing wrong.Thank you so much!
milly mc
"Life is a foreign language; all mispronounce it."
Christopher Morley
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