Thanks, I also have another major problem with the subjects I am working on.
Two of the subjects intend to freeze at #@# Fix Topology rh step while running reconstruction process.
CORRECTING DEFECT 12 (vertices=29993, convex hull=7603)

I will upload one of the subjects to your ftp site, if you could take a look to see what is the defect.
Really appreciate your help in advance,

Maryam
 






Regards,
Maryam Kouchakidivkolaei




On Thursday, January 28, 2016 5:51 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:


Hi Maryam
We are working hard to get it out, but it's not quite ready yet. We will make an announcement when we have a beta version
Bruce

On Jan 28, 2016, at 8:25 PM, maryam koochaki <maryam_koochaki@yahoo.com> wrote:

Hi Bruce,
How can I download version 6?


Best,
Maryam
 






Regards,
Maryam Kouchakidivkolaei


On Thursday, January 28, 2016 5:55 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:


Hi Maryam

have you look at the aseg? I suspect that it didn't properly handle the
very large ventricles in this subject. Try manually editing it. V6
handles this kind of thing significantly better

cheers
Bruce

On Thu, 28 Jan 2016, maryam
koochaki wrote:

> Hi Bruce,
> I am editing a brain with Freesurfer version 5.3. I have a issue in Lateral
> Ventricle. As you can see in the image attached, the big part is excluded in
> both hemisphere. I tried to fill it by editing wm volume but the problem
> still exists.
> Do you have any suggestion?
> Thanks,
> Maryam
>  
>
>
>
>
>
>
>
>
>

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.



_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.