Did you put a fiducial on your subject to mark left and right. If not, whey do you suspect the results are flipped? Did you use dicom file or did you convert them to something else before running recon-all?

On 12/3/2020 12:31 PM, Mora, Jocelyn S. wrote:

Hi,

If you are interested in checking information on the volume itself, try mri_info. If you would like specific examples for reference, I would recommend using our wiki pages.

Cheers,

Jocelyn

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Edoardo Pinzuti <edoardo.pinzuti@gmail.com>
Sent: Thursday, December 3, 2020 10:34 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] flipped_hemisphere

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Hi,

after performing a segmentation with Freesurfer and making a Bem model it looks that some results are flipped between right and left hemispheres. Is there a way to check that Freesurfer is interpreting correctly the mri ?

Thanks
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