Hello FreeSurfer Developers,

I have just tried to install FreeSurfer on a new machine and I met a problem with recon-all command.

I have tried the tutorial command : recon-all -s bert -all

And I have the error message : recon-all -s bert exited with ERRORS.

My machine is on Ubuntu 16.04.

I installed : freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0

I attached my recon-all.log.

$FREESURFER_HOME /usr/local/freesurfer

I saw a similar problem with virtualbox shared folder but it is not my case here.

Do you have an idea of the problem ?

Thank you,

__

Emeline MULLIER

PhD Candidate

Department of Radiology

Center hospitalier universitaire vaudois (CHUV) and Université de Lausanne (UNIL)

Rue du Bugnon 46, CH-1011