Victor

On Tue, Jul 30, 2013 at 12:49 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:

Hi victor
If you upload the subject I will take a look. 5.3 may help
Bruce

On Jul 30, 2013, at 1:36 PM, Victor Kovac <kovac081@umn.edu> wrote:

> Dear Freesurfer experts,
>
> I am running recon-all on very atrophied brains with mixed results. Attached is an image of a brain where segmentation has gone awry. There is no message indicating talairach failure, and the segmentation appears to need WM and pial edits as well as the ventricles to be filled, so I am not sure how to proceed.
>
> If you have any recommendations as to how to fix these errors, I would very much appreciate it -- these data are past their deadline, and I am at a loss.
>
> Thank you!
>
> Sincerely,
> Victor

> <Bad_segmentation.png>
> <recon-all.log>
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