Hello again, <div><br></div><div>Seems the problem is solved by using 2 as the arg for registration method (calculate identity). There was an error elsewhere in the tcl script. <br><div> _________________________________<br>
Sid Kundu<font size="1"><br>Biomedical Engineering<br>Boston University </font><br><br>
<br><br><div class="gmail_quote">On Wed, Aug 29, 2012 at 4:41 PM, Sid Kundu <span dir="ltr">&lt;<a href="mailto:sidkundu@bu.edu" target="_blank">sidkundu@bu.edu</a>&gt;</span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
Hello Freesurfers,<div><br></div><div>I have a basic question as I&#39;m just getting into scripting, but I&#39;m trying to write a script that loads overlays from multiple contrasts and takes images. However, I can&#39;t figure out how to properly load nifti files as overlays. I&#39;m attempting to load .nii volumes from group level analysis (which should need no registration file), so when I use sclv_read_from_volume setting the argument for registration type to 1 or 2 (look for register.dat, or calculate identity) both fail. Any help on this would be much appreciated. Thanks in advance. </div>


<div> _________________________________<span class="HOEnZb"><font color="#888888"><br>Sid Kundu<font size="1"><br>Biomedical Engineering<br>Boston University </font><br><br>
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