I don't know if this will help, but here's a TCL script that you can
pass to tkmedit with the -tcl option. It changes the orientation and
slice number. You might be able to write a TCL function that you can
call from the TCL prompt. Unfortunately, this TCL functionality is
completely undocumented. Others might have some scripts that are closer
to what you want.
doug
Jared Price wrote:
Hi
everybody. This is Jared over at BWH. We are currently working on
some manual editing of segmentation volumes. This requires
repetitively switching the view between the segmentation volume and the
black and white MRI volume as you edit. This is normally done in
TkMedit with the control-g keystroke which activates the "Segmentation
Overlay" command in the View menu. In editing the segmentation volume
for any given patient the number of times that this keystroke is used
is on the order of hundreds to thousands. What we would like to do is
find a way to automate that keystroke so that during editing the view
would automatically switch every 5 seconds or so between the black and
white MRI image and the segmentation overlay. We use MAC OS X,
leopard, and have thought of using automator or apple script to
automate the command. We think this might be difficult to do because
the "segmentation overlay" command cannot be elicited from Terminal
(Terminal is Mac OS's command-line interface). If the "segmentation
overlay" command could be elicited from a command-line prompt it should
be a simple matter to create a script that would repetitively enter
this command. Does anyone know how we could accomplish automation of
this task within TkMedit?
All the best,
Jared
Jared Price
Center for Neurological Imaging
Brigham and Women's Hospital
Harvard Medical School
1249 Boylston Street
Boston, MA 02115
617-525-6076
jcp44@bwh.harvard.edu
The information transmitted in this electronic communication is
intended only for the person or entity to whom it is addressed and may
contain confidential and/or privileged material. Any review,
retransmission, dissemination or other use of or taking of any action
in reliance upon this information by persons or entities other than the
intended recipient is prohibited. If you received this information in
error, please contact the Compliance Help Line at 800-856-1983 and
properly dispose of this information.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting