Hi everyone,

I have just finished running glmfit. When I try to load the significance maps in freeview, they appear to load for a moment and then disappear, just showing the brain volume without any highlighted areas of significance. Does anyone have any idea why this could be?

I ran the command: freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:annot=aparc.annot:annot_outline=1:overlay=lh.g4v1.glmdir/bipolar-vs-schizophrenia/sig.mgh:overlay_threshold=4,5 -viewport 3d

Kindest Regards,

Marie