Yes, it's the tail.
All subfield are segmented jointly.
Cheers
E

Sent from my phone, please excuse brevity and typos


From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Jessica Sevick <jessica.sevick1@ucalgary.ca>
Sent: Sunday, February 26, 2017 7:54:28 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Hippocampal Segmentation
 
Hi Eugenio,

Thanks for getting back to me and yes it is version 5.1-5.3. I will speak to my IT department about upgrading to version 6.0, but can you let me know about the processing details for the older version in the meantime? We have already processed a group of subjects and my Investigator would like to know.

Thanks,
Jessica

Sent from my iPhone

On Feb 24, 2017, at 9:51 PM, Iglesias Gonzalez, Eugenio <e.iglesias@ucl.ac.uk> wrote:

Hi Jessica,
I believe that those are the old labels. What version of FreeSurfer are you using? 5.1 - 5.3? If so, you should upgrade to 6.0.
Cheers,
/Eugenio

Juan Eugenio Iglesias
ERC Senior Research Fellow
Translational Imaging Group
University College London
http://www.jeiglesias.com
http://cmictig.cs.ucl.ac.uk/


On 24 Feb 2017, at 19:18, Jessica Sevick <jessica.sevick1@ucalgary.ca> wrote:

Hello FreeSurfer Team , 

I was wondering if you could explain to me what the “Left-Hippocampus” and “Right-Hippocampus” labels in the subfield segmentation are? Are they the tail of the hippocampi? Or everything that is not assigned to one of the other seven labels? 

Additionally I am wondering how the hippocampal subfields are ordered in terms of their determination? Is it a particular order or is it randomized?

Thanks, 

Jessica Sevick
MRI Research Assistant 
Seaman Family MR Research Centre
T: 403.944.8652
C: 587.576.6666
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