I have installed the 

and I would like to use the MNI Linear Register option.  

I have been prompted that "MNI has not been align not yet implemented."

Because of this message, I have changed my SetUpFreeSurfer.csh script so that the following directories are pointed to the corresponding path instead of the default that came with the package. 

MINC_BIN_DIR    /Users/Shared/freesurfer/lib/mni/bin

MINC_LIB_DIR    /Users/Shared/freesurfer/lib/mni/lib

PERL5LIB        /System/Library/Perl/5.8.6

However, I still get the same message.  

Is there something I am missing?

Thanks in advance. 

Eric