Hi Freesurfer Developers,

 

Our group is hoping to obtain the cortical thickness, surface area, and volume for various cortical regions (as well as some subcortical volumes); however, we would like these values to be outputted with respect to the regions delineated in the Hammersmith atlas. This atlas is available for free online (http://brain-development.org/brain-atlases/adult-brain-maximum-probability-map-hammers-mith-atlas-n30r83-in-mni-space/) and I’ve included a screenshot to show you what files are included in the download. Based on this information, what is the best and/or most straight forward to move forward?

 

Thank you for your time. I look forward to hearing from you.

 

  1. FreeSurfer version: freesurfer-i386-apple-darwin11.4.2-stable6-20170119
  2. Platform: macOS High Sierra (Version 10.13.1)

 

Best,

 

Ryan

--

Ryan Flores

Clinical Research Coordinator