Bruse,

I apologize, I thought you were answering another question that I had
submitted, which I had foremost in my mind. I will look at mri_label2label
in more detail now in the proper context.

Thanks,

-Jeff

On 7/13/13 11:31 AM, "Bruce Fischl" <fischl@nmr.mgh.harvard.edu> wrote:

>Hi Jeff
>mri_label2label should do what you want
>Cheers
>Bruce
>
>On Jul 12, 2013, at 6:45 PM, Jeff Eriksen <eriksenj@ohsu.edu> wrote:
>
>> I have the Yeo resting-state fMRI atlases which I downloaded from
>>
>> http://www.freesurfer.net/fswiki/CorticalParcellation_Yeo2011
>>
>> They consist of 3 versions, fsaverage being of interest here. The
>> fsaverage folder provided includes the typical FS folders corresponding
>>a
>> recon-all for the average brain for this atlas. I wish to use this high
>> resolution atlas to parcellate my individual subjects. I am unclear how
>>to
>> go about this. I have perused wiki pages on
>>
>> Annotation files
>> FS labels
>> Automatic surface labeling process
>> Surface registration process
>>
>> but still do not find a clear path to my goal. Specifically I would like
>> to end up with a matching set of surface and annot files, as high of
>> resolution as possible, for each of my subjects. Using some specific
>> numbers, the Yeo atlas has around 300,000 vertices when combining the
>> lh.pial and rh.pial surfaces. The matching annot files I believe are
>> l&rh.Yeo2011_17Networks_N1000.annot, which together should also have
>> 300,000 vertices. I suppose what I need to do is align each of my
>>subjects
>> to this atlas and project the atlas onto each subject to get a new
>>surface
>> and annot file for that subject, which will have some unique number of
>> vertices for each subject.
>>
>> Please point me to the right set of documentation that will tell me how
>>to
>> do this. Thanks,
>>
>> -Jeff
>>
>>
>> _______________________________________________
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>
>>
>
>

>The information in this e-mail is intended only for the person to whom it
>is
>addressed. If you believe this e-mail was sent to you in error and the
>e-mail
>contains patient information, please contact the Partners Compliance
>HelpLine at
>http://www.partners.org/complianceline . If the e-mail was sent to you in
>error
>but does not contain patient information, please contact the sender and
>properly
>dispose of the e-mail.
>

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer