Hi All,<br><br>I wanted to get peoples advice on the best method of registration/interpolation to use on a manually traced segmentation (and its structural) that is not in the same space and orientation as the structurals I started Freesurfer with (although they both originally came from the same image. I want to maintain the integrity of the manual traced binary mask through this registration and reslice. For a number of reasons, I do not want to take Freesurfers output to the space of the manual segmentation.<br>

<br>What do people think is a good technique? Flirt nearest neighbor interpolation? Something different from Freesurfer? ANTs?<br clear="all"><div><div><font color="#999999">-<br></font></div><div><font color="#999999">Josh</font></div>

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