In a number of our subjects I've been finding white matter hypointensities around the anterior edge of the caudate, as well as mislabelings of the corpus callosum as cerebral white matter (at and/or around slice 128, sagittal).  Has anyone else encountered these problems, and are there fixes that don't involve manually doctoring the mislabelings (such as setting a particular flag for recon)?

I am quite new to FS so please forgive any rudimentary misunderstandings.

Thank you!

Warren

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Warren Winter

Lab Coordinator

Children's Hospital Boston

Division of Developmental Medicine

1 Autumn Street, AU 650

Boston, MA 02215

857-218-5224