You should be able to use asegstats2table specifying the samseg inputs with --inputs samseg1/seg.stats samseg2/seg.stats samseg3/seg.stats ...

On 7/26/2021 11:12 PM, AJ wrote:

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Hi,

I was wondering if there is a simple command for generating a table from all the SamsegOutput/stats files across all subjects.  When I use the asegstats2table, I get index error: list index out of range.  I guess this has to do with the structure of files in the samsegOutput/stats  versus the aseg.stats file?

Thank you. 

AJ

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