jue ago 8 10:48:35 CEST 2019 /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO /usr/local/freesurfer/bin/trac-all -prep -c dmric_FISCUBO_unaltre.hsphd Subject T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 SUBJECTS_DIR /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO FREESURFER_HOME /usr/local/freesurfer Actual FREESURFER_HOME /usr/local/freesurfer build-stamp.txt: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c freds utm Linux utm 4.4.0-116-generic #140-Ubuntu SMP Mon Feb 12 21:23:04 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 127242 maxlocks unlimited maxsignal 127242 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 32622308 731012 29713380 18660 2177916 31433364 Swap: 3998716 0 3998716 ######################################## Program versions: $Id: trac-all,v 1.60.2.1 2016/12/20 17:04:05 zkaufman Exp $ mri_convert.bin --all-info ProgramName: mri_convert.bin ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 FLIRT version 6.0 $Id: bbregister,v 1.75 2016/05/10 20:02:28 greve Exp $ $Id: mri_cvs_register,v 1.48 2016/03/06 21:31:56 lzollei Exp $ ProgramName: dmri_motion ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: dmri_train ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: dmri_paths ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: dmri_pathstats ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: dmri_mergepaths ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: dmri_group ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2019/08/08-08:48:35-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: User: freds Machine: utm Platform: Linux PlatformVersion: 4.4.0-116-generic CompilerName: GCC CompilerVersion: 40400 New invocation of trac-preproc freds utm Linux utm 4.4.0-116-generic #140-Ubuntu SMP Mon Feb 12 21:23:04 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 64 kbytes maxproc 127242 maxlocks unlimited maxsignal 127242 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 32622308 731824 29687036 18660 2203448 31432460 Swap: 3998716 0 3998716 #------------------------------------- /usr/local/freesurfer/bin/trac-preproc #------------------------------------- #@# Image corrections jue ago 8 10:48:35 CEST 2019 mri_convert --bvec-voxel /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/dtidata/herasDTIcubo/IMG-0001-00001.dcm /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz mri_convert.bin --bvec-voxel /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/dtidata/herasDTIcubo/IMG-0001-00001.dcm /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/dtidata/herasDTIcubo/IMG-0001-00001.dcm... Starting DICOMRead2() dcmfile = /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/dtidata/herasDTIcubo/IMG-0001-00001.dcm dcmdir = /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/dtidata/herasDTIcubo Ref Series No = 4 Found 2114 files, checking for dicoms Found 2112 dicom files in series. First Sorting Computing Slice Direction Vs: 0 0.273 1.9812 Vs: 0 0.136505 0.990639 Second Sorting IsDWI = 1, IsPhilipsDWI = 0 Counting frames nframes = 33 nslices = 64 ndcmfiles = 2112 PE Dir = COL (dicom read) Loading pixel data TR=10000.00, TE=80.80, TI=0.00, flip angle=90.00 i_ras = (-1, 0, 0) j_ras = (0, -0.990624, -0.136619) k_ras = (-0, -0.136505, 0.990639) writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz... Saving bvals and bvecs mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.voxel_space.bvecs /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.bvecs mri_probedicom --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/dtidata/herasDTIcubo/IMG-0001-00001.dcm > /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dcminfo.dat mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs.tmp /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.bvecs mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals.tmp /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.bvals orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.nii.gz INFO: input image orientation is LPS INFO: input image determinant is 2 mri_convert -oni 256 -onj 256 -onk 64 -oid -1 0 0 -ojd 0 0.990624 0.136619 -okd 0 -0.136505 0.990639 -oc 0.516006 52.1004 12.582 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 64 -oid -1 0 0 -ojd 0 0.990624 0.136619 -okd 0 -0.136505 0.990639 -oc 0.516006 52.1004 12.582 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.nii.gz normalizing out_j_direction: (0, 0.990624, 0.136619) -> (0, 0.990624, 0.136619) normalizing out_k_direction: (0, -0.136505, 0.990639) -> (0, -0.136505, 0.990639) $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz... TR=10000.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, -0.990624, -0.136619) k_ras = (-0, -0.136505, 0.990639) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.nii.gz... INFO: found /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.bvals, copying INFO: found /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.bvecs, converting to LAS mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.bvecs /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.bvals /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals eddy_correct /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig_las.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz 0 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0000 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0001 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0002 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0003 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0004 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0005 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0006 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0007 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0008 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0009 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0010 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0011 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0012 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0013 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0014 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0015 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0016 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0017 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0018 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0019 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0020 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0021 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0022 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0023 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0024 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0025 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0026 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0027 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0028 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0029 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0030 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0031 processing /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_tmp0032 mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs.norot xfmrot /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.ecclog /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs.norot /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs ln -sf /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/data.nii.gz mri_convert --frame 0 /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz mri_convert.bin --frame 0 /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz... TR=1000.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0.990624, 0.136619) k_ras = (0, -0.136505, 0.990639) keeping frame 0 writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz... mri_concat --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz --mean --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Computing mean across frames Writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz bet /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb_brain.nii.gz -m -f 0.3 mv -f /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb_brain_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff #------------------------------------- #@# Image quality assessment jue ago 8 11:04:56 CEST 2019 /usr/local/freesurfer/bin/dmri_motion --dwi /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz --mat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.ecclog --bval /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals --T 1391.000000 --out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_motion.txt cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline /usr/local/freesurfer/bin/dmri_motion --dwi /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz --mat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.ecclog --bval /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals --T 1391.000000 --out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_motion.txt sysname Linux hostname utm machine x86_64 user freds Output motion measure file: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_motion.txt Input transform file: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.ecclog Input DWI file: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz Input b-value table: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals Low-b image intensity threshold: 1391 Nominal diffusivity: 0.001 Loading volume-to-baseline affine transformations Computing between-volume head motion measures INFO: Processed transforms for 33 volumes Loading DWI volume series from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_orig.nii.gz Loading b-value table from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals Computing within-volume head motion measures Done in 6.463 sec. dmri_motion done #------------------------------------- #@# Intra-subject registration jue ago 8 11:05:03 CEST 2019 mri_convert /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brain.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz mri_convert.bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brain.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brain.mgz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz... orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz... tkregister2 --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz --targ /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz --regheader --noedit --fslregout /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2anat.mat --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2anatorig.dat tkregister_tcl /usr/local/freesurfer/tktools/tkregister2.tcl target volume /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz movable volume /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz reg file /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2anatorig.dat LoadVol 0 ZeroCRAS 0 $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ Diagnostic Level -1 INFO: loading target /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz INFO: target does not conform to COR format, so I'm going to reslice to COR. This will not affect the final registration. Ttarg: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; INFO: loading movable /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz Tmov: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; mkheaderreg = 1, float2int = 0 Computing reg from header (and possibly input matrix) ---- Input registration matrix (computed) -------- 1.00000 0.00000 0.00000 0.00000; 0.00000 1.00000 0.00000 0.00000; 0.00000 0.00000 1.00000 1.00000; 0.00000 0.00000 0.00000 1.00000; --------------------------------------- ---- Input registration matrix -------- 1.00000 0.00000 0.00000 0.00000; 0.00000 1.00000 0.00000 0.00000; 0.00000 0.00000 1.00000 1.00000; 0.00000 0.00000 0.00000 1.00000; Determinant 1 subject = subject-unknown RegMat --------------------------- 1.00000 0.00000 0.00000 0.00000; 0.00000 0.00000 -1.00000 0.00000; 0.00000 1.00000 0.00000 1.00000; 0.00000 0.00000 0.00000 1.00000; FSLOUTPUTTYPE NIFTI_GZ tkreg2FSL: mov det = -1, ref det = -1 convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2anatorig.mat -inverse /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2anat.mat tmp /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052 Log file is /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat.log jue ago 8 11:05:05 CEST 2019 setenv SUBJECTS_DIR /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO cd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO /usr/local/freesurfer/bin/bbregister --s T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 --init-fsl --dti --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat --fslmat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2anatorig.bbr.mat $Id: bbregister,v 1.75 2016/05/10 20:02:28 greve Exp $ Linux utm 4.4.0-116-generic #140-Ubuntu SMP Mon Feb 12 21:23:04 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux FREESURFER_HOME /usr/local/freesurfer mri_convert /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii mri_convert.bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz... TR=1000.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0.990624, 0.136619) k_ras = (0, -0.136505, 0.990639) writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii... fslregister --s T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat --niters 1 --maxangle 90 --tmp /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister --dof 6 --fsvol brainmask.mgz --nobetmov Log file is /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat.fslregister.log jue ago 8 11:05:11 CEST 2019 --s T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat --niters 1 --maxangle 90 --tmp /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister --dof 6 --fsvol brainmask.mgz --nobetmov $Id: fslregister,v 1.40 2016/02/12 21:43:15 zkaufman Exp $ utm Linux utm 4.4.0-116-generic #140-Ubuntu SMP Mon Feb 12 21:23:04 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux nIters 1 -------------------------------------- /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO mri_convert /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brainmask.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/refvol.fslregister.nii mri_convert.bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brainmask.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/refvol.fslregister.nii $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brainmask.mgz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/refvol.fslregister.nii... -------------------------------------- /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO mri_convert /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii --frame 0 mri_convert.bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii --frame 0 $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii... TR=1000.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0.990624, 0.136619) k_ras = (0, -0.136505, 0.990639) keeping frame 0 writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii... Mov determinant is -2 /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO tkregister2_cmdl --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/reg0.4097.dat --regheader --fslregout /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat.fsl.mat0 --s T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 --noedit tkregister_tcl /usr/local/freesurfer/tktools/tkregister2.tcl INFO: no target volume specified, assuming FreeSurfer orig volume. target volume orig movable volume /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii reg file /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/reg0.4097.dat LoadVol 0 ZeroCRAS 0 $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ Diagnostic Level -1 INFO: loading target /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/orig.mgz Ttarg: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; INFO: loading movable /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii Tmov: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 2.00000 -64.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; mkheaderreg = 1, float2int = 0 Computing reg from header (and possibly input matrix) ---- Input registration matrix (computed) -------- 1.00000 0.00000 0.00000 1.58598; 0.00000 -0.13662 0.99062 -18.34916; 0.00000 -0.99064 -0.13651 1.33316; 0.00000 0.00000 0.00000 1.00000; --------------------------------------- ---- Input registration matrix -------- 1.00000 0.00000 0.00000 1.58598; 0.00000 -0.13662 0.99062 -18.34916; 0.00000 -0.99064 -0.13651 1.33316; 0.00000 0.00000 0.00000 1.00000; Determinant 1 subject = T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 RegMat --------------------------- 1.00000 0.00000 0.00000 1.58598; 0.00000 -0.13662 0.99062 -18.34916; 0.00000 -0.99064 -0.13651 1.33316; 0.00000 0.00000 0.00000 1.00000; FSLOUTPUTTYPE NIFTI tkreg2FSL: mov det = -2, ref det = -1 jue ago 8 11:05:15 CEST 2019 /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO flirt.fsl -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/refvol.fslregister.nii -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii -bins 256 -cost corratio -dof 6 -searchrx -90 90 -searchry -90 90 -searchrz -90 90 -verbose 0 -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/fslmat0.trans.mat -schedule /usr/local/freesurfer/bin/fsl.5.0.2.xyztrans.sch -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat.fsl.mat0 jue ago 8 11:05:35 CEST 2019 /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO flirt.fsl -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/refvol.fslregister.nii -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/movvol.fslregister.nii -bins 256 -cost corratio -dof 6 -searchrx -90 90 -searchry -90 90 -searchrz -90 90 -verbose 0 -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat.fsl.mat -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/fslregister/fslmat0.trans.mat -schedule /usr/local/freesurfer/bin/flirt.newdefault.20080811.sch tkregister2_cmdl --s T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat --fslreg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat.fsl.mat --noedit tkregister_tcl /usr/local/freesurfer/tktools/tkregister2.tcl ---- FSL registration matrix -------- 1.00000 0.00014 0.00103 1.52546; 0.00104 -0.13662 -0.99064 192.16100; 0.00000 0.99062 -0.13650 8.98392; 0.00000 0.00000 0.00000 1.00000; --------------------------------------- INFO: no target volume specified, assuming FreeSurfer orig volume. target volume orig movable volume /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii reg file /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat LoadVol 0 ZeroCRAS 0 $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ Diagnostic Level -1 INFO: loading target /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/orig.mgz Ttarg: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; INFO: loading movable /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii Tmov: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 2.00000 -64.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; mkheaderreg = 0, float2int = 0 FSLOUTPUTTYPE NIFTI fsl2TkReg: mov det = -2, ref det = -1 ---- Input registration matrix (computed) -------- 1.00000 -0.00000 0.00104 1.59216; -0.00103 -0.13662 0.99062 -16.57022; 0.00014 -0.99064 -0.13650 1.32178; 0.00000 0.00000 0.00000 1.00000; --------------------------------------- ---- Input registration matrix -------- 1.00000 -0.00000 0.00104 1.59216; -0.00103 -0.13662 0.99062 -16.57022; 0.00014 -0.99064 -0.13650 1.32178; 0.00000 0.00000 0.00000 1.00000; Determinant 1 subject = T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 RegMat --------------------------- 1.00000 -0.00000 0.00104 1.59216; -0.00103 -0.13662 0.99062 -16.57022; 0.00014 -0.99064 -0.13650 1.32178; 0.00000 0.00000 0.00000 1.00000; (standard_in) 1: illegal character: T (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: G (standard_in) 1: illegal character: O (standard_in) 1: illegal character: N (standard_in) 1: illegal character: Z (standard_in) 1: syntax error (standard_in) 1: illegal character: L (standard_in) 1: illegal character: Z (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: L (standard_in) 1: illegal character: S (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: H (standard_in) 1: illegal character: R (standard_in) 1: illegal character: S (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: T (standard_in) 1: illegal character: R (standard_in) 1: illegal character: S (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: N (standard_in) 1: illegal character: N (standard_in) 1: illegal character: S (standard_in) 1: illegal character: S (standard_in) 1: illegal character: P (standard_in) 1: illegal character: G (standard_in) 1: illegal character: R (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: G (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: N (standard_in) 1: illegal character: N (standard_in) 1: illegal character: S (standard_in) 1: illegal character: S (standard_in) 1: illegal character: P (standard_in) 1: illegal character: G (standard_in) 1: illegal character: R (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: G (standard_in) 1: illegal character: _ (standard_in) 1: illegal character: _ Started at jue ago 8 11:05:11 CEST 2019 Ended at jue ago 8 11:06:04 CEST 2019 fslregister Done To check results, run: tkregister2 --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat --surf orig mri_segreg --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --init-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat --out-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat --subsamp-brute 100 --subsamp 100 --tol 1e-4 --tol1d 1e-3 --brute -4 4 4 --surf white --gm-proj-frac 0.5 --gm-gt-wm 0.5 $Id: mri_segreg.c,v 1.113 2016/05/10 03:23:20 greve Exp $ setenv SUBJECTS_DIR /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO cd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO mri_segreg --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --init-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat --out-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat --subsamp-brute 100 --subsamp 100 --tol 1e-4 --tol1d 1e-3 --brute -4 4 4 --surf white --gm-proj-frac 0.5 --gm-gt-wm 0.5 sysname Linux hostname utm machine x86_64 user freds movvol /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii regfile /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.init.dat subject T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 dof 6 outregfile /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat UseMask 0 UseLH 1 UseRH 1 nsubsamp 100 PenaltySign -1 PenaltySlope 0.500000 PenaltyCenter 0.000000 surfname white GMProjFrac 0.500000 WMProjAbs 2.000000 lhcostfile (null) rhcostfile (null) interp trilinear (1) frame 0 TolPowell 0.000100 nMaxItersPowell 36 n1dmin 3 Profile 0 Gdiag_no -1 AddNoise 0 (0) SynthSeed 1566220512 TransRandMax 0.000000 RotRandMax 0.000000 Translations 0.000000 0.000000 0.000000 Rotations 0.000000 0.000000 0.000000 Input reg 1.00000 -0.00000 0.00104 1.59216; -0.00103 -0.13662 0.99062 -16.57022; 0.00014 -0.99064 -0.13650 1.32178; 0.00000 0.00000 0.00000 1.00000; Loading mov Extracting frame 0 Projecting LH Surfs Loading lh.white surf Loading lh.thickness for GM GM Proj: 1 0.500000 2.000000 WM Proj: 0 0.500000 2.000000 Projecting RH Surfs Loading rh.white surf Loading rh.thickness for GM Projecting RH Surfs Using lh.cortex.label Using rh.cortex.label Computing relative cost 0 -25.0 -25.0 -25.0 1.014605 1 -25.0 -25.0 25.0 0.986401 2 -25.0 25.0 -25.0 0.983626 3 -25.0 25.0 25.0 1.001310 4 25.0 -25.0 -25.0 0.991288 5 25.0 -25.0 25.0 1.015260 6 25.0 25.0 -25.0 1.003120 7 25.0 25.0 25.0 1.039129 REL: 8 0.650226 8.034739 1.004342 rel = 0.647414 Initial costs ---------------- Number of surface hits 2344 WM Intensity 1841.9683 +/- 675.2217 Ctx Intensity 2355.8224 +/- 1058.2109 Pct Contrast 19.7362 +/- 46.1106 Cost 0.6502 RelCost 0.6474 ------------------------------------ Brute force preopt -4 4 4, n = 729 0 -4.0000 -4.0000 -4.0000 -4.0000 -4.0000 -4.0000 0.9714 0.9714 0.0 13 -4.0000 -4.0000 -4.0000 0.0000 0.0000 0.0000 0.9673 0.9673 0.0 15 -4.0000 -4.0000 -4.0000 0.0000 4.0000 -4.0000 0.9182 0.9182 0.0 33 -4.0000 -4.0000 0.0000 -4.0000 4.0000 -4.0000 0.9002 0.9002 0.0 34 -4.0000 -4.0000 0.0000 -4.0000 4.0000 0.0000 0.8540 0.8540 0.0 123 -4.0000 0.0000 0.0000 0.0000 4.0000 -4.0000 0.8337 0.8337 0.0 124 -4.0000 0.0000 0.0000 0.0000 4.0000 0.0000 0.8276 0.8276 0.0 274 0.0000 -4.0000 0.0000 -4.0000 0.0000 0.0000 0.7139 0.7139 0.0 364 0.0000 0.0000 0.0000 0.0000 0.0000 0.0000 0.6502 0.6502 0.0 Brute Force -------------------------- Min cost was 0.650226 Number of iterations 729 Search time 0.688000 sec Parameters at best (transmm, rotdeg) 0.000 0.000 0.000 0.000 0.000 0.000 -------------------------------------------- Starting Powell Minimization Init Powel Params dof = 6 0 0 1 0 2 0 3 0 4 0 5 0 fs_powell::minimize nparams 6 maxfev 36 ftol 0.000100 linmin_xtol_ 0.001000 powell nthiter 0: fret = 0.650226 6 0.382 0.000 0.000 0.000 0.000 0.000 0.6428002948 10 0.393 0.000 0.000 0.000 0.000 0.000 0.6425854705 11 0.407 0.000 0.000 0.000 0.000 0.000 0.6423035421 13 0.415 0.000 0.000 0.000 0.000 0.000 0.6422030902 14 0.417 0.000 0.000 0.000 0.000 0.000 0.6421949361 16 0.418 0.000 0.000 0.000 0.000 0.000 0.6421934338 19 0.418 -1.618 0.000 0.000 0.000 0.000 0.4808020629 26 0.418 -1.708 0.000 0.000 0.000 0.000 0.4806052508 28 0.418 -1.679 0.000 0.000 0.000 0.000 0.4802303007 29 0.418 -1.668 0.000 0.000 0.000 0.000 0.4801644514 30 0.418 -1.657 0.000 0.000 0.000 0.000 0.4801404544 32 0.418 -1.661 0.000 0.000 0.000 0.000 0.4801274120 33 0.418 -1.660 0.000 0.000 0.000 0.000 0.4801272583 39 0.418 -1.660 -0.618 0.000 0.000 0.000 0.4723387010 42 0.418 -1.660 -0.764 0.000 0.000 0.000 0.4694218730 46 0.418 -1.660 -0.761 0.000 0.000 0.000 0.4694209974 48 0.418 -1.660 -0.762 0.000 0.000 0.000 0.4694202103 55 0.418 -1.660 -0.762 -0.195 0.000 0.000 0.4680479701 56 0.418 -1.660 -0.762 -0.141 0.000 0.000 0.4654534542 58 0.418 -1.660 -0.762 -0.126 0.000 0.000 0.4652116161 60 0.418 -1.660 -0.762 -0.128 0.000 0.000 0.4652038537 62 0.418 -1.660 -0.762 -0.129 0.000 0.000 0.4652038114 70 0.418 -1.660 -0.762 -0.129 -0.212 0.000 0.4620583621 72 0.418 -1.660 -0.762 -0.129 -0.240 0.000 0.4613482519 74 0.418 -1.660 -0.762 -0.129 -0.295 0.000 0.4588859617 76 0.418 -1.660 -0.762 -0.129 -0.289 0.000 0.4587074497 78 0.418 -1.660 -0.762 -0.129 -0.283 0.000 0.4586401811 91 0.418 -1.660 -0.762 -0.129 -0.283 -0.034 0.4583952417 93 0.418 -1.660 -0.762 -0.129 -0.283 -0.026 0.4582990329 94 0.418 -1.660 -0.762 -0.129 -0.283 -0.022 0.4582550300 96 0.418 -1.660 -0.762 -0.129 -0.283 -0.019 0.4582448486 powell nthiter 1: fret = 0.458245 109 0.419 -1.660 -0.762 -0.129 -0.283 -0.019 0.4582427853 121 0.419 -1.659 -0.762 -0.129 -0.283 -0.019 0.4582402779 129 0.419 -1.659 -0.777 -0.129 -0.283 -0.019 0.4577014479 132 0.419 -1.659 -0.792 -0.129 -0.283 -0.019 0.4574496105 144 0.419 -1.659 -0.793 -0.181 -0.283 -0.019 0.4566425869 147 0.419 -1.659 -0.793 -0.180 -0.283 -0.019 0.4566424232 158 0.419 -1.659 -0.793 -0.180 -0.279 -0.019 0.4566280272 172 0.419 -1.659 -0.793 -0.180 -0.279 -0.034 0.4563815111 173 0.419 -1.659 -0.793 -0.180 -0.279 -0.035 0.4563781048 174 0.419 -1.659 -0.793 -0.180 -0.279 -0.036 0.4563776712 powell nthiter 2: fret = 0.456378 187 0.431 -1.659 -0.793 -0.180 -0.279 -0.036 0.4562941845 188 0.429 -1.659 -0.793 -0.180 -0.279 -0.036 0.4562851643 189 0.428 -1.659 -0.793 -0.180 -0.279 -0.036 0.4562820163 198 0.428 -1.669 -0.793 -0.180 -0.279 -0.036 0.4559191885 199 0.428 -1.678 -0.793 -0.180 -0.279 -0.036 0.4558377215 211 0.428 -1.678 -0.782 -0.180 -0.279 -0.036 0.4556994040 212 0.428 -1.678 -0.781 -0.180 -0.279 -0.036 0.4556992882 222 0.428 -1.678 -0.781 -0.207 -0.279 -0.036 0.4554636735 224 0.428 -1.678 -0.781 -0.199 -0.279 -0.036 0.4554233447 249 0.428 -1.678 -0.781 -0.199 -0.279 -0.022 0.4554128455 250 0.428 -1.678 -0.781 -0.199 -0.279 -0.029 0.4553836020 253 0.437 -1.696 -0.769 -0.218 -0.279 -0.021 0.4553709657 powell nthiter 3: fret = 0.455384 274 0.429 -1.684 -0.781 -0.199 -0.279 -0.029 0.4553706674 275 0.429 -1.682 -0.781 -0.199 -0.279 -0.029 0.4553660984 287 0.429 -1.682 -0.774 -0.199 -0.279 -0.029 0.4552976752 288 0.429 -1.682 -0.773 -0.199 -0.279 -0.029 0.4552959831 298 0.429 -1.682 -0.773 -0.214 -0.279 -0.029 0.4552759125 299 0.429 -1.682 -0.773 -0.207 -0.279 -0.029 0.4552519116 312 0.429 -1.682 -0.773 -0.207 -0.280 -0.029 0.4552509383 325 0.429 -1.682 -0.773 -0.207 -0.280 -0.025 0.4552442482 powell nthiter 4: fret = 0.455244 338 0.431 -1.682 -0.773 -0.207 -0.280 -0.025 0.4552429749 340 0.430 -1.682 -0.773 -0.207 -0.280 -0.025 0.4552421643 350 0.430 -1.683 -0.773 -0.207 -0.280 -0.025 0.4552414985 361 0.430 -1.683 -0.769 -0.207 -0.280 -0.025 0.4552320359 362 0.430 -1.683 -0.770 -0.207 -0.280 -0.025 0.4552314660 373 0.430 -1.683 -0.770 -0.209 -0.280 -0.025 0.4552307274 398 0.430 -1.683 -0.770 -0.209 -0.280 -0.024 0.4552301551 Powell done niters = 4 Computing relative cost 0 -25.0 -25.0 -25.0 1.017042 1 -25.0 -25.0 25.0 1.010444 2 -25.0 25.0 -25.0 0.968069 3 -25.0 25.0 25.0 1.008291 4 25.0 -25.0 -25.0 1.019532 5 25.0 -25.0 25.0 1.069565 6 25.0 25.0 -25.0 1.020273 7 25.0 25.0 25.0 1.029818 REL: 8 0.455230 8.143035 1.017879 rel = 0.447234 Number of iterations 4 Min cost was 0.455230 Number of FunctionCalls 400 TolPowell 0.000100 nMaxItersPowell 36 OptimizationTime 0.375000 sec Parameters at optimum (transmm) 0.43046 -1.68298 -0.77039 Parameters at optimum (rotdeg) -0.20919 -0.28041 -0.02420 Final costs ---------------- Number of surface hits 2344 WM Intensity 1775.9469 +/- 642.5422 Ctx Intensity 2317.5106 +/- 972.2488 Pct Contrast 23.1115 +/- 41.2383 Cost 0.4552 RelCost 0.6474 Reg at min cost was 0.99999 0.00479 0.00214 2.00885; -0.00145 -0.14024 0.99012 -18.24893; 0.00504 -0.99012 -0.14011 0.61966; 0.00000 0.00000 0.00000 1.00000; Writing optimal reg to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat, type = 14 Original Reg 1.00000 -0.00000 0.00104 1.59216; -0.00103 -0.13662 0.99062 -16.57022; 0.00014 -0.99064 -0.13650 1.32178; 0.00000 0.00000 0.00000 1.00000; Original Reg - Optimal Reg 0.00001 -0.00479 -0.00110 -0.41668; 0.00042 0.00362 0.00051 1.67871; -0.00490 -0.00052 0.00361 0.70212; 0.00000 0.00000 0.00000 0.00000; Computing change in lh position LH rmsDiffMean 1.880884 Computing change in rh position Surface-RMS-Diff-mm 1.836987 0.169067 2.218750 mri_segreg done mri_segreg --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --init-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat --out-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat --interp trilinear --wm-proj-abs 2 --tol 1e-8 --tol1d 1e-3 --c0 0 --mincost /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat.mincost --dof 6 --nmax 36 --param /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat.param --surf white --brute -0.1 0.1 0.1 --cur-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.curopt.dat --gm-proj-frac 0.5 --nsub 1 --gm-gt-wm 0.5 $Id: mri_segreg.c,v 1.113 2016/05/10 03:23:20 greve Exp $ setenv SUBJECTS_DIR /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO cd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO mri_segreg --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii --init-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat --out-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat --interp trilinear --wm-proj-abs 2 --tol 1e-8 --tol1d 1e-3 --c0 0 --mincost /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat.mincost --dof 6 --nmax 36 --param /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat.param --surf white --brute -0.1 0.1 0.1 --cur-reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/reg.curopt.dat --gm-proj-frac 0.5 --nsub 1 --gm-gt-wm 0.5 sysname Linux hostname utm machine x86_64 user freds movvol /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/template.nii regfile /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/tmp.bbregister.4052/bbr.pass1.dat subject T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 dof 6 outregfile /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat UseMask 0 UseLH 1 UseRH 1 nsubsamp 1 PenaltySign -1 PenaltySlope 0.500000 PenaltyCenter 0.000000 surfname white GMProjFrac 0.500000 WMProjAbs 2.000000 lhcostfile (null) rhcostfile (null) interp trilinear (1) frame 0 TolPowell 0.000000 nMaxItersPowell 36 n1dmin 3 Profile 0 Gdiag_no -1 AddNoise 0 (0) SynthSeed 1565257898 TransRandMax 0.000000 RotRandMax 0.000000 Translations 0.000000 0.000000 0.000000 Rotations 0.000000 0.000000 0.000000 Input reg 0.99999 0.00479 0.00214 2.00885; -0.00145 -0.14024 0.99012 -18.24893; 0.00504 -0.99012 -0.14011 0.61966; 0.00000 0.00000 0.00000 1.00000; Loading mov Extracting frame 0 Projecting LH Surfs Loading lh.white surf Loading lh.thickness for GM GM Proj: 1 0.500000 2.000000 WM Proj: 0 0.500000 2.000000 Projecting RH Surfs Loading rh.white surf Loading rh.thickness for GM Projecting RH Surfs Using lh.cortex.label Using rh.cortex.label Computing relative cost 0 -25.0 -25.0 -25.0 1.011649 1 -25.0 -25.0 25.0 0.988706 2 -25.0 25.0 -25.0 0.977937 3 -25.0 25.0 25.0 1.004080 4 25.0 -25.0 -25.0 1.027700 5 25.0 -25.0 25.0 1.012225 6 25.0 25.0 -25.0 1.002038 7 25.0 25.0 25.0 1.017192 REL: 8 0.475284 8.041527 1.005191 rel = 0.47283 Initial costs ---------------- Number of surface hits 234570 WM Intensity 1792.1713 +/- 638.1050 Ctx Intensity 2311.0376 +/- 919.5113 Pct Contrast 22.2595 +/- 40.3670 Cost 0.4753 RelCost 0.4728 ------------------------------------ Brute force preopt -0.1 0.1 0.1, n = 729 0 -0.1000 -0.1000 -0.1000 -0.1000 -0.1000 -0.1000 0.4641 0.4641 0.0 1 -0.1000 -0.1000 -0.1000 -0.1000 -0.1000 0.0000 0.4596 0.4596 0.0 2 -0.1000 -0.1000 -0.1000 -0.1000 -0.1000 0.1000 0.4595 0.4595 0.0 12 -0.1000 -0.1000 -0.1000 0.0000 0.0000 -0.1000 0.4576 0.4576 0.0 14 -0.1000 -0.1000 -0.1000 0.0000 0.0000 0.1000 0.4572 0.4572 0.0 17 -0.1000 -0.1000 -0.1000 0.0000 0.1000 0.1000 0.4567 0.4567 0.0 62 -0.1000 -0.1000 0.1000 -0.1000 0.1000 0.1000 0.4554 0.4554 0.0 254 0.0000 -0.1000 -0.1000 0.0000 -0.1000 0.1000 0.4529 0.4529 0.0 515 0.1000 -0.1000 0.0000 -0.1000 -0.1000 0.1000 0.4527 0.4527 0.0 Brute Force -------------------------- Min cost was 0.452718 Number of iterations 729 Search time 0.676000 sec Parameters at best (transmm, rotdeg) 0.100 -0.100 0.000 -0.100 -0.100 0.100 -------------------------------------------- Starting Powell Minimization Init Powel Params dof = 6 0 0.1 1 -0.1 2 0 3 -0.1 4 -0.1 5 0.1 fs_powell::minimize nparams 6 maxfev 36 ftol 0.000000 linmin_xtol_ 0.001000 powell nthiter 0: fret = 0.480178 7 0.061 -0.100 0.000 -0.100 -0.100 0.100 0.4800274476 9 0.068 -0.100 0.000 -0.100 -0.100 0.100 0.4800176034 11 0.070 -0.100 0.000 -0.100 -0.100 0.100 0.4800169842 12 0.071 -0.100 0.000 -0.100 -0.100 0.100 0.4800169422 20 0.071 -0.175 0.000 -0.100 -0.100 0.100 0.4794901767 21 0.071 -0.173 0.000 -0.100 -0.100 0.100 0.4794890350 22 0.071 -0.170 0.000 -0.100 -0.100 0.100 0.4794882214 23 0.071 -0.169 0.000 -0.100 -0.100 0.100 0.4794880749 24 0.071 -0.168 0.000 -0.100 -0.100 0.100 0.4794880192 32 0.071 -0.168 0.382 -0.100 -0.100 0.100 0.4778584824 33 0.071 -0.168 0.239 -0.100 -0.100 0.100 0.4769622961 34 0.071 -0.168 0.240 -0.100 -0.100 0.100 0.4769552770 35 0.071 -0.168 0.277 -0.100 -0.100 0.100 0.4768008419 39 0.071 -0.168 0.274 -0.100 -0.100 0.100 0.4767985392 48 0.071 -0.168 0.274 -0.054 -0.100 0.100 0.4767623917 49 0.071 -0.168 0.274 -0.072 -0.100 0.100 0.4766682292 50 0.071 -0.168 0.274 -0.075 -0.100 0.100 0.4766646541 51 0.071 -0.168 0.274 -0.077 -0.100 0.100 0.4766639056 53 0.071 -0.168 0.274 -0.078 -0.100 0.100 0.4766638367 60 0.071 -0.168 0.274 -0.078 0.282 0.100 0.4763538848 61 0.071 -0.168 0.274 -0.078 0.096 0.100 0.4738472886 62 0.071 -0.168 0.274 -0.078 0.097 0.100 0.4738415778 63 0.071 -0.168 0.274 -0.078 0.124 0.100 0.4738138556 65 0.071 -0.168 0.274 -0.078 0.114 0.100 0.4737914356 75 0.071 -0.168 0.274 -0.078 0.114 0.109 0.4737886165 77 0.071 -0.168 0.274 -0.078 0.114 0.107 0.4737880233 78 0.071 -0.168 0.274 -0.078 0.114 0.106 0.4737880181 powell nthiter 1: fret = 0.473788 87 -0.091 -0.168 0.274 -0.078 0.114 0.106 0.4714166380 90 -0.096 -0.168 0.274 -0.078 0.114 0.106 0.4714129040 91 -0.097 -0.168 0.274 -0.078 0.114 0.106 0.4714128354 99 -0.097 -0.122 0.274 -0.078 0.114 0.106 0.4711737053 109 -0.097 -0.121 0.306 -0.078 0.114 0.106 0.4711198832 111 -0.097 -0.121 0.305 -0.078 0.114 0.106 0.4711184550 113 -0.097 -0.121 0.300 -0.078 0.114 0.106 0.4711154943 115 -0.097 -0.121 0.299 -0.078 0.114 0.106 0.4711153461 122 -0.097 -0.121 0.299 -0.020 0.114 0.106 0.4703842767 123 -0.097 -0.121 0.299 0.008 0.114 0.106 0.4702700582 124 -0.097 -0.121 0.299 0.014 0.114 0.106 0.4702689070 127 -0.097 -0.121 0.299 0.013 0.114 0.106 0.4702688763 134 -0.097 -0.121 0.299 0.013 0.219 0.106 0.4695772807 138 -0.097 -0.121 0.299 0.013 0.259 0.106 0.4694837054 139 -0.097 -0.121 0.299 0.013 0.284 0.106 0.4694711441 140 -0.097 -0.121 0.299 0.013 0.281 0.106 0.4694645566 141 -0.097 -0.121 0.299 0.013 0.274 0.106 0.4694626767 143 -0.097 -0.121 0.299 0.013 0.276 0.106 0.4694620369 144 -0.097 -0.121 0.299 0.013 0.277 0.106 0.4694619674 153 -0.097 -0.121 0.299 0.013 0.277 0.097 0.4694543899 157 -0.264 -0.073 0.324 0.104 0.440 0.088 0.4689853214 163 -0.200 -0.091 0.315 0.069 0.378 0.092 0.4685692960 165 -0.203 -0.090 0.315 0.071 0.381 0.092 0.4685652402 167 -0.205 -0.090 0.315 0.072 0.382 0.092 0.4685647450 170 -0.204 -0.090 0.315 0.072 0.382 0.092 0.4685646864 powell nthiter 2: fret = 0.468565 177 -0.204 -0.090 0.315 0.072 0.382 0.023 0.4683694137 178 -0.204 -0.090 0.315 0.072 0.382 0.030 0.4683613323 188 -0.204 -0.014 0.315 0.072 0.382 0.030 0.4678646403 190 -0.204 -0.015 0.315 0.072 0.382 0.030 0.4678645280 197 -0.204 -0.015 0.290 0.072 0.382 0.030 0.4678498777 198 -0.204 -0.015 0.296 0.072 0.382 0.030 0.4678464455 201 -0.204 -0.015 0.297 0.072 0.382 0.030 0.4678463665 208 -0.204 -0.015 0.297 0.063 0.382 0.030 0.4678239561 209 -0.204 -0.015 0.297 0.051 0.382 0.030 0.4678234101 211 -0.204 -0.015 0.297 0.057 0.382 0.030 0.4678203800 213 -0.204 -0.015 0.297 0.058 0.382 0.030 0.4678201361 221 -0.204 -0.015 0.297 0.058 0.298 0.030 0.4672059116 223 -0.204 -0.015 0.297 0.058 0.299 0.030 0.4672056753 234 -0.208 -0.014 0.297 0.060 0.302 0.030 0.4672056106 235 -0.206 -0.015 0.297 0.059 0.301 0.030 0.4672053595 238 -0.206 -0.015 0.297 0.059 0.301 0.030 0.4672052922 239 -0.206 -0.015 0.297 0.059 0.301 0.030 0.4672052758 powell nthiter 3: fret = 0.467205 247 -0.206 -0.015 0.297 0.059 0.301 -0.020 0.4670720161 249 -0.206 -0.015 0.297 0.059 0.301 -0.011 0.4670630412 251 -0.206 -0.015 0.297 0.059 0.301 -0.009 0.4670629612 259 -0.206 -0.014 0.297 0.059 0.301 -0.009 0.4670569629 260 -0.206 0.012 0.297 0.059 0.301 -0.009 0.4670442973 262 -0.206 0.000 0.297 0.059 0.301 -0.009 0.4670149576 273 -0.206 0.000 0.307 0.059 0.301 -0.009 0.4670095388 274 -0.206 0.000 0.304 0.059 0.301 -0.009 0.4670083785 285 -0.206 0.000 0.304 0.045 0.301 -0.009 0.4669967748 286 -0.206 0.000 0.304 0.050 0.301 -0.009 0.4669909263 297 -0.206 0.000 0.304 0.050 0.302 -0.009 0.4669907820 305 -0.225 0.006 0.307 0.060 0.321 -0.010 0.4669709271 306 -0.221 0.005 0.306 0.058 0.317 -0.010 0.4669666556 307 -0.219 0.004 0.306 0.057 0.315 -0.010 0.4669654817 309 -0.218 0.004 0.306 0.056 0.314 -0.010 0.4669651027 311 -0.218 0.004 0.306 0.056 0.313 -0.010 0.4669650674 312 -0.218 0.004 0.306 0.056 0.313 -0.010 0.4669650663 powell nthiter 4: fret = 0.466965 322 -0.218 0.004 0.306 0.056 0.313 -0.019 0.4669574797 333 -0.218 0.002 0.306 0.056 0.313 -0.019 0.4669573704 343 -0.218 0.002 0.310 0.056 0.313 -0.019 0.4669548931 345 -0.218 0.002 0.312 0.056 0.313 -0.019 0.4669547410 356 -0.218 0.002 0.312 0.041 0.313 -0.019 0.4669439796 357 -0.218 0.002 0.312 0.047 0.313 -0.019 0.4669355447 367 -0.218 0.002 0.312 0.047 0.312 -0.019 0.4669326724 368 -0.218 0.002 0.312 0.047 0.308 -0.019 0.4669296860 370 -0.218 0.002 0.312 0.047 0.309 -0.019 0.4669296223 378 -0.230 0.005 0.314 0.053 0.321 -0.020 0.4669284386 379 -0.224 0.004 0.313 0.050 0.315 -0.019 0.4669238713 383 -0.231 0.004 0.320 0.044 0.317 -0.029 0.4669158388 389 -0.228 0.004 0.317 0.047 0.317 -0.025 0.4669137700 390 -0.229 0.004 0.318 0.046 0.317 -0.026 0.4669135751 391 -0.229 0.004 0.318 0.046 0.317 -0.026 0.4669133602 powell nthiter 5: fret = 0.466913 408 -0.229 0.004 0.318 0.046 0.317 -0.022 0.4669114761 409 -0.229 0.004 0.318 0.046 0.317 -0.021 0.4669113955 419 -0.229 -0.001 0.318 0.046 0.317 -0.021 0.4669055185 431 -0.229 -0.001 0.320 0.046 0.317 -0.021 0.4669050191 442 -0.226 -0.002 0.319 0.044 0.314 -0.021 0.4669037885 443 -0.226 -0.002 0.320 0.045 0.314 -0.021 0.4669037041 444 -0.226 -0.001 0.320 0.045 0.314 -0.021 0.4669036682 456 -0.226 -0.001 0.320 0.045 0.313 -0.021 0.4669035535 464 -0.227 -0.001 0.320 0.044 0.314 -0.022 0.4669033247 467 -0.227 -0.001 0.321 0.044 0.314 -0.023 0.4669031957 469 -0.227 -0.001 0.321 0.044 0.314 -0.023 0.4669031672 powell nthiter 6: fret = 0.466903 482 -0.227 -0.001 0.321 0.044 0.314 -0.020 0.4669025549 483 -0.227 -0.001 0.321 0.044 0.314 -0.021 0.4669025056 492 -0.227 -0.002 0.321 0.044 0.314 -0.021 0.4669023430 548 -0.227 -0.003 0.321 0.044 0.314 -0.021 0.4669023136 powell nthiter 7: fret = 0.466902 562 -0.228 -0.003 0.321 0.044 0.314 -0.021 0.4669023063 565 -0.228 -0.003 0.321 0.043 0.314 -0.022 0.4669022517 570 -0.228 -0.003 0.321 0.043 0.314 -0.022 0.4669022426 574 -0.228 -0.003 0.321 0.043 0.314 -0.022 0.4669022130 593 -0.228 -0.003 0.319 0.043 0.314 -0.022 0.4669020091 595 -0.228 -0.003 0.320 0.043 0.314 -0.022 0.4669018266 604 -0.228 -0.003 0.320 0.043 0.314 -0.022 0.4669017431 622 -0.228 -0.003 0.320 0.043 0.314 -0.021 0.4669016537 626 -0.228 -0.004 0.319 0.042 0.314 -0.021 0.4669016204 633 -0.228 -0.003 0.319 0.043 0.314 -0.021 0.4669014941 powell nthiter 8: fret = 0.466901 648 -0.228 -0.003 0.319 0.042 0.314 -0.022 0.4669014303 651 -0.228 -0.003 0.319 0.042 0.314 -0.022 0.4669014271 654 -0.228 -0.003 0.319 0.042 0.314 -0.022 0.4669013916 671 -0.228 -0.003 0.319 0.042 0.314 -0.022 0.4669013886 672 -0.228 -0.003 0.319 0.042 0.314 -0.022 0.4669013841 675 -0.228 -0.003 0.319 0.042 0.314 -0.022 0.4669013664 697 -0.228 -0.003 0.319 0.042 0.315 -0.022 0.4669011875 705 -0.228 -0.004 0.319 0.042 0.315 -0.022 0.4669011181 706 -0.228 -0.004 0.319 0.042 0.315 -0.022 0.4669011093 712 -0.228 -0.004 0.319 0.042 0.315 -0.022 0.4669010348 716 -0.228 -0.004 0.319 0.042 0.315 -0.022 0.4669010302 powell nthiter 9: fret = 0.466901 752 -0.228 -0.004 0.319 0.042 0.315 -0.022 0.4669010282 Powell done niters = 9 Computing relative cost 0 -25.0 -25.0 -25.0 1.010600 1 -25.0 -25.0 25.0 0.986111 2 -25.0 25.0 -25.0 0.977908 3 -25.0 25.0 25.0 1.002077 4 25.0 -25.0 -25.0 1.026528 5 25.0 -25.0 25.0 1.015495 6 25.0 25.0 -25.0 0.999248 7 25.0 25.0 25.0 1.016813 REL: 8 0.466901 8.034780 1.004347 rel = 0.46488 Number of iterations 9 Min cost was 0.466901 Number of FunctionCalls 793 TolPowell 0.000000 nMaxItersPowell 36 OptimizationTime 40.638000 sec Parameters at optimum (transmm) -0.22837 -0.00350 0.31898 Parameters at optimum (rotdeg) 0.04231 0.31481 -0.02165 Final costs ---------------- Number of surface hits 234570 WM Intensity 1773.2949 +/- 608.7249 Ctx Intensity 2286.4894 +/- 887.6074 Pct Contrast 22.2960 +/- 39.7983 Cost 0.4669 RelCost 0.4728 Reg at min cost was 1.00000 -0.00071 0.00175 1.77688; -0.00183 -0.13951 0.99022 -18.25365; -0.00046 -0.99024 -0.13939 0.91412; 0.00000 0.00000 0.00000 1.00000; Writing optimal reg to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat, type = 14 Original Reg 0.99999 0.00479 0.00214 2.00885; -0.00145 -0.14024 0.99012 -18.24893; 0.00504 -0.99012 -0.14011 0.61966; 0.00000 0.00000 0.00000 1.00000; Original Reg - Optimal Reg -0.00001 0.00549 0.00039 0.23196; 0.00038 -0.00073 -0.00010 0.00471; 0.00550 0.00011 -0.00072 -0.29446; 0.00000 0.00000 0.00000 0.00000; Computing change in lh position LH rmsDiffMean 0.512528 Computing change in rh position Surface-RMS-Diff-mm 0.394701 0.156490 0.712982 mri_segreg done MinCost: 0.466901 1773.294860 2286.489390 22.295955 tkregister2_cmdl --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat --noedit --fslregout /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2anatorig.bbr.mat tkregister_tcl /usr/local/freesurfer/tktools/tkregister2.tcl INFO: no target volume specified, assuming FreeSurfer orig volume. target volume orig movable volume /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz reg file /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat LoadVol 0 ZeroCRAS 0 $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ Diagnostic Level -1 ---- Input registration matrix -------- 1.00000 -0.00071 0.00175 1.77688; -0.00183 -0.13951 0.99022 -18.25365; -0.00046 -0.99024 -0.13939 0.91412; 0.00000 0.00000 0.00000 1.00000; float2int = 0 --------------------------------------- INFO: loading target /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/orig.mgz Ttarg: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; INFO: loading movable /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz Tmov: -------------------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 2.00000 -64.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; mkheaderreg = 0, float2int = 0 ---- Input registration matrix -------- 1.00000 -0.00071 0.00175 1.77688; -0.00183 -0.13951 0.99022 -18.25365; -0.00046 -0.99024 -0.13939 0.91412; 0.00000 0.00000 0.00000 1.00000; Determinant 1 subject = T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 RegMat --------------------------- 1.00000 -0.00071 0.00175 1.77688; -0.00183 -0.13951 0.99022 -18.25365; -0.00046 -0.99024 -0.13939 0.91412; 0.00000 0.00000 0.00000 1.00000; FSLOUTPUTTYPE NIFTI_GZ tkreg2FSL: mov det = -2, ref det = -1 Cleaning up Started at jue ago 8 11:05:05 CEST 2019 Ended at jue ago 8 11:07:04 CEST 2019 BBR-Run-Time-Sec 119 bbregister Done To check results, run: tkregisterfv --mov /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.dat --surfs convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.mat -inverse /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2anatorig.bbr.mat convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -concat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2diff.bbr.mat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2anatorig.mat convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2anat.bbr.mat -inverse /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat #------------------------------------- #@# Inter-subject registration jue ago 8 11:07:04 CEST 2019 flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_mni.nii.gz -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -cost mutualinfo convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2anat.mat -inverse /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat -concat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2anat.bbr.mat convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2diff.bbr.mat -inverse /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2mni.mat -concat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2anat.mat convert_xfm -omat /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2anatorig.mat -inverse /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anatorig2mni.mat #------------------------------------- #@# Masks jue ago 8 11:08:29 CEST 2019 mri_binarize --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 2 --match 7 --match 41 --match 46 --match 77 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline mri_binarize.bin --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 2 --match 7 --match 41 --match 46 --match 77 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz sysname Linux hostname utm machine x86_64 user freds input /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz frame 0 nErode3d 0 nErode2d 0 output /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz Binarizing based on matching values nMatch 5 0 2 1 7 2 41 3 46 4 77 binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 352034 values in range Counting number of voxels in first frame Found 352034 voxels in final mask Count: 352034 352034.000000 16777216 2.098286 mri_binarize done mri_binarize --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 2 --match 7 --match 41 --match 46 --match 77 --match 28 --match 60 --match 16 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline mri_binarize.bin --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 2 --match 7 --match 41 --match 46 --match 77 --match 28 --match 60 --match 16 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz sysname Linux hostname utm machine x86_64 user freds input /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz frame 0 nErode3d 0 nErode2d 0 output /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz Binarizing based on matching values nMatch 8 0 2 1 7 2 41 3 46 4 77 5 28 6 60 7 16 binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 378009 values in range Counting number of voxels in first frame Found 378009 voxels in final mask Count: 378009 378009.000000 16777216 2.253109 mri_binarize done mri_binarize --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 4 --match 43 --binval 0 --binvalnot 1 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline mri_binarize.bin --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 4 --match 43 --binval 0 --binvalnot 1 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz sysname Linux hostname utm machine x86_64 user freds input /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz frame 0 nErode3d 0 nErode2d 0 output /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz Binarizing based on matching values nMatch 2 0 4 1 43 binval 0 binvalnot 1 fstart = 0, fend = 0, nframes = 1 Found 17014 values in range Counting number of voxels in first frame Found 17014 voxels in final mask Count: 17014 17014.000000 16777216 0.101411 mri_binarize done mri_aparc2aseg --s T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 --annot aparc --wmparc-dmax 2 --labelwm --hypo-as-wm --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz SUBJECTS_DIR /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO subject T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3 outvol /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz useribbon 0 baseoffset 0 labeling wm labeling hypo-intensities as wm dmaxctx 2.000000 RipUnknown 0 Reading lh white surface /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/surf/lh.white Reading lh pial surface /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/surf/lh.pial Loading lh annotations from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/surf/rh.white Reading rh pial surface /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/surf/rh.pial Loading rh annotations from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/ribbon.mgz Loading filled from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aseg.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 737351 Used brute-force search on 0 voxels Fixing Parahip LH WM Found 10 clusters 0 k 6.000000 1 k 1.000000 2 k 1.000000 3 k 1.000000 4 k 1.000000 5 k 1.000000 6 k 648.000000 7 k 1.000000 8 k 1.000000 9 k 1.000000 Fixing Parahip RH WM Found 4 clusters 0 k 1.000000 1 k 1.000000 2 k 2.000000 3 k 609.000000 Writing output aseg to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz mri_binarize --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz --min 1000 --max 2999 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline mri_binarize.bin --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz --min 1000 --max 2999 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz sysname Linux hostname utm machine x86_64 user freds input /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz frame 0 nErode3d 0 nErode2d 0 output /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz Binarizing based on threshold min 1000 max 2999 binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 409276 values in range Counting number of voxels in first frame Found 409276 voxels in final mask Count: 409276 409276.000000 16777216 2.439475 mri_binarize done mri_binarize --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz --min 1000 --max 4999 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline mri_binarize.bin --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz --min 1000 --max 4999 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz sysname Linux hostname utm machine x86_64 user freds input /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz frame 0 nErode3d 0 nErode2d 0 output /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz Binarizing based on threshold min 1000 max 4999 binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 634067 values in range Counting number of voxels in first frame Found 634067 voxels in final mask Count: 634067 634067.000000 16777216 3.779334 mri_binarize done mri_binarize --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 16 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/Brain-Stem.nii.gz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline mri_binarize.bin --i /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz --match 16 --o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/Brain-Stem.nii.gz sysname Linux hostname utm machine x86_64 user freds input /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz frame 0 nErode3d 0 nErode2d 0 output /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/Brain-Stem.nii.gz Binarizing based on matching values nMatch 1 0 16 binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 19830 values in range Counting number of voxels in first frame Found 19830 voxels in final mask Count: 19830 19830.000000 16777216 0.118196 mri_binarize done fslmaths /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz -add /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/Brain-Stem.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm+bs.nii.gz mri_convert /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brainmask.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz mri_convert.bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brainmask.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/brainmask.mgz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz... fslmaths /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz -mul /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask-vent.nii.gz mri_convert /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz mri_convert.bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/FS_CUBO/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/mri/aparc+aseg.mgz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz... fslmaths /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz -dilM -bin /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg_mask.nii.gz orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/White-Matter.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/White-Matter.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter++.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter++.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter++.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/White-Matter++.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter++.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter++.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/White-Matter++.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/White-Matter++.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/White-Matter++.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/notventricles.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/notventricles.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/notventricles.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/notventricles.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/notventricles.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/notventricles.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/notventricles.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/notventricles.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/notventricles.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/cortex.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/cortex.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/cortex+2mm.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/cortex+2mm.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm+bs.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm+bs.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm+bs.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm+bs.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm+bs.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm+bs.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/cortex+2mm+bs.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm+bs.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm+bs.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/cortex+2mm+bs.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/cortex+2mm+bs.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/cortex+2mm+bs.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/aparc+aseg.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg+2mm.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg+2mm.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg+2mm.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg+2mm.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg+2mm.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg+2mm.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/aparc+aseg+2mm.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg+2mm.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg+2mm.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg_mask.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg_mask.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg_mask.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/aparc+aseg_mask.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg_mask.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg_mask.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/aparc+aseg_mask.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/aparc+aseg_mask.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg_mask.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/anat_brain_mask.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/anat_brain_mask.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour orientLAS /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask-vent.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask-vent.nii.gz INFO: input image orientation is LIA INFO: input image determinant is -1 mri_convert -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask-vent.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask-vent.nii.gz mri_convert.bin -oni 256 -onj 256 -onk 256 -oid -1 0 0 -ojd 0 1 0 -okd 0 0 1 -oc 2.10199 53.2845 -4.77752 -rt nearest /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask-vent.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask-vent.nii.gz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/anat_brain_mask-vent.nii.gz... TR=11.74, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) Reslicing using nearest writing to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask-vent.nii.gz... flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask-vent.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/lowb.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/anat_brain_mask-vent.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2diff.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anat/anat_brain_mask-vent.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/anat_brain_mask-vent.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/anat2mni.mat -interp nearestneighbour fslstats -t /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz -k /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/White-Matter++.bbr.nii.gz -m -s | awk '{print $1/$2}' > /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi_snr.txt flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lowb_brain_mask.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lowb_brain_mask.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat -interp nearestneighbour flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lowb_brain_mask.nii.gz -ref /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/brain_anat_orig.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/anatorig/lowb_brain_mask.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2anatorig.bbr.mat -interp nearestneighbour ln -sf /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/aparc+aseg_mask.bbr.nii.gz /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/nodif_brain_mask.nii.gz #------------------------------------- #@# Tensor fit jue ago 8 11:11:29 CEST 2019 dtifit -k /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dwi.nii.gz -m /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/aparc+aseg_mask.bbr.nii.gz -r /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvecs -b /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/bvals -o /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit 0 256 0 256 0 64 0 slices processed 1 slices processed 2 slices processed 3 slices processed 4 slices processed 5 slices processed 6 slices processed 7 slices processed 8 slices processed 9 slices processed 10 slices processed 11 slices processed 12 slices processed 13 slices processed 14 slices processed 15 slices processed 16 slices processed 17 slices processed 18 slices processed 19 slices processed 20 slices processed 21 slices processed 22 slices processed 23 slices processed 24 slices processed 25 slices processed 26 slices processed 27 slices processed 28 slices processed 29 slices processed 30 slices processed 31 slices processed 32 slices processed 33 slices processed 34 slices processed 35 slices processed 36 slices processed 37 slices processed 38 slices processed 39 slices processed 40 slices processed 41 slices processed 42 slices processed 43 slices processed 44 slices processed 45 slices processed 46 slices processed 47 slices processed 48 slices processed 49 slices processed 50 slices processed 51 slices processed 52 slices processed 53 slices processed 54 slices processed 55 slices processed 56 slices processed 57 slices processed 58 slices processed 59 slices processed 60 slices processed 61 slices processed 62 slices processed 63 slices processed flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_FA.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_FA.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_L1.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_L1.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_L2.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_L2.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_L3.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_L3.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_MD.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_MD.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_MO.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_MO.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat flirt -in /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_S0.nii.gz -ref /usr/share/fsl/5.0/data/standard/MNI152_T1_1mm_brain.nii.gz -out /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/mni/dtifit_S0.bbr.nii.gz -applyxfm -init /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/diff2mni.bbr.mat #------------------------------------- #@# Priors jue ago 8 11:11:45 CEST 2019 /usr/local/freesurfer/bin/dmri_train --outdir /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni --out lh.cst_AS_avg33_mni_bbr rh.cst_AS_avg33_mni_bbr lh.ilf_AS_avg33_mni_bbr rh.ilf_AS_avg33_mni_bbr lh.unc_AS_avg33_mni_bbr rh.unc_AS_avg33_mni_bbr fmajor_PP_avg33_mni_bbr fminor_PP_avg33_mni_bbr lh.atr_PP_avg33_mni_bbr rh.atr_PP_avg33_mni_bbr lh.ccg_PP_avg33_mni_bbr rh.ccg_PP_avg33_mni_bbr lh.cab_PP_avg33_mni_bbr rh.cab_PP_avg33_mni_bbr lh.slfp_PP_avg33_mni_bbr rh.slfp_PP_avg33_mni_bbr lh.slft_PP_avg33_mni_bbr rh.slft_PP_avg33_mni_bbr --slist /tmp/subj33.T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3.3064.txt --trk dlabel/mni/lh.cst_AS.bbr.trk dlabel/mni/rh.cst_AS.bbr.trk dlabel/mni/lh.ilf_AS.bbr.trk dlabel/mni/rh.ilf_AS.bbr.trk dlabel/mni/lh.unc_AS.bbr.trk dlabel/mni/rh.unc_AS.bbr.trk dlabel/mni/fmajor_PP.bbr.trk dlabel/mni/fminor_PP.bbr.trk dlabel/mni/lh.atr_PP.bbr.trk dlabel/mni/rh.atr_PP.bbr.trk dlabel/mni/lh.ccg_PP.bbr.trk dlabel/mni/rh.ccg_PP.bbr.trk dlabel/mni/lh.cab_PP.bbr.trk dlabel/mni/rh.cab_PP.bbr.trk dlabel/mni/lh.slfp_PP.bbr.trk dlabel/mni/rh.slfp_PP.bbr.trk dlabel/mni/lh.slft_PP.bbr.trk dlabel/mni/rh.slft_PP.bbr.trk --seg dlabel/mni/aparc+aseg.nii.gz --cmask dlabel/mni/cortex+2mm.nii.gz --lmask 16 16 0 0 0 0 0 0 10 49 0 0 0 0 0 0 0 0 --rois dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz dlabel/mni/fmajor_PP_roi1.bbr.nii.gz dlabel/mni/fmajor_PP_roi2.bbr.nii.gz dlabel/mni/fminor_PP_roi1.bbr.nii.gz dlabel/mni/fminor_PP_roi2.bbr.nii.gz dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz --bmask /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg_mask.nii.gz --fa /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_FA.nii.gz --cptdir /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2diff.bbr.mat --ncpts 6 6 5 5 5 5 7 5 5 5 5 5 4 4 5 5 5 5 --trunc cwd /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO cmdline /usr/local/freesurfer/bin/dmri_train --outdir /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni --out lh.cst_AS_avg33_mni_bbr rh.cst_AS_avg33_mni_bbr lh.ilf_AS_avg33_mni_bbr rh.ilf_AS_avg33_mni_bbr lh.unc_AS_avg33_mni_bbr rh.unc_AS_avg33_mni_bbr fmajor_PP_avg33_mni_bbr fminor_PP_avg33_mni_bbr lh.atr_PP_avg33_mni_bbr rh.atr_PP_avg33_mni_bbr lh.ccg_PP_avg33_mni_bbr rh.ccg_PP_avg33_mni_bbr lh.cab_PP_avg33_mni_bbr rh.cab_PP_avg33_mni_bbr lh.slfp_PP_avg33_mni_bbr rh.slfp_PP_avg33_mni_bbr lh.slft_PP_avg33_mni_bbr rh.slft_PP_avg33_mni_bbr --slist /tmp/subj33.T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3.3064.txt --trk dlabel/mni/lh.cst_AS.bbr.trk dlabel/mni/rh.cst_AS.bbr.trk dlabel/mni/lh.ilf_AS.bbr.trk dlabel/mni/rh.ilf_AS.bbr.trk dlabel/mni/lh.unc_AS.bbr.trk dlabel/mni/rh.unc_AS.bbr.trk dlabel/mni/fmajor_PP.bbr.trk dlabel/mni/fminor_PP.bbr.trk dlabel/mni/lh.atr_PP.bbr.trk dlabel/mni/rh.atr_PP.bbr.trk dlabel/mni/lh.ccg_PP.bbr.trk dlabel/mni/rh.ccg_PP.bbr.trk dlabel/mni/lh.cab_PP.bbr.trk dlabel/mni/rh.cab_PP.bbr.trk dlabel/mni/lh.slfp_PP.bbr.trk dlabel/mni/rh.slfp_PP.bbr.trk dlabel/mni/lh.slft_PP.bbr.trk dlabel/mni/rh.slft_PP.bbr.trk --seg dlabel/mni/aparc+aseg.nii.gz --cmask dlabel/mni/cortex+2mm.nii.gz --lmask 16 16 0 0 0 0 0 0 10 49 0 0 0 0 0 0 0 0 --rois dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz dlabel/mni/fmajor_PP_roi1.bbr.nii.gz dlabel/mni/fmajor_PP_roi2.bbr.nii.gz dlabel/mni/fminor_PP_roi1.bbr.nii.gz dlabel/mni/fminor_PP_roi2.bbr.nii.gz dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz --bmask /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg_mask.nii.gz --fa /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_FA.nii.gz --cptdir /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff --reg /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults//T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2diff.bbr.mat --ncpts 6 6 5 5 5 5 7 5 5 5 5 5 4 4 5 5 5 5 --trunc sysname Linux hostname utm machine x86_64 user freds Output directory: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni Output directory in test subject's space: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff Output base: lh.cst_AS_avg33_mni_bbr rh.cst_AS_avg33_mni_bbr lh.ilf_AS_avg33_mni_bbr rh.ilf_AS_avg33_mni_bbr lh.unc_AS_avg33_mni_bbr rh.unc_AS_avg33_mni_bbr fmajor_PP_avg33_mni_bbr fminor_PP_avg33_mni_bbr lh.atr_PP_avg33_mni_bbr rh.atr_PP_avg33_mni_bbr lh.ccg_PP_avg33_mni_bbr rh.ccg_PP_avg33_mni_bbr lh.cab_PP_avg33_mni_bbr rh.cab_PP_avg33_mni_bbr lh.slfp_PP_avg33_mni_bbr rh.slfp_PP_avg33_mni_bbr lh.slft_PP_avg33_mni_bbr rh.slft_PP_avg33_mni_bbr Training subject directory list: /tmp/subj33.T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3.3064.txt Location of streamline files relative to base: dlabel/mni/lh.cst_AS.bbr.trk dlabel/mni/rh.cst_AS.bbr.trk dlabel/mni/lh.ilf_AS.bbr.trk dlabel/mni/rh.ilf_AS.bbr.trk dlabel/mni/lh.unc_AS.bbr.trk dlabel/mni/rh.unc_AS.bbr.trk dlabel/mni/fmajor_PP.bbr.trk dlabel/mni/fminor_PP.bbr.trk dlabel/mni/lh.atr_PP.bbr.trk dlabel/mni/rh.atr_PP.bbr.trk dlabel/mni/lh.ccg_PP.bbr.trk dlabel/mni/rh.ccg_PP.bbr.trk dlabel/mni/lh.cab_PP.bbr.trk dlabel/mni/rh.cab_PP.bbr.trk dlabel/mni/lh.slfp_PP.bbr.trk dlabel/mni/rh.slfp_PP.bbr.trk dlabel/mni/lh.slft_PP.bbr.trk dlabel/mni/rh.slft_PP.bbr.trk Location of start ROI files relative to base: dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz dlabel/mni/fmajor_PP_roi1.bbr.nii.gz dlabel/mni/fminor_PP_roi1.bbr.nii.gz dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Location of end ROI files relative to base: dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz dlabel/mni/fmajor_PP_roi2.bbr.nii.gz dlabel/mni/fminor_PP_roi2.bbr.nii.gz dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Location of cortex masks relative to base: dlabel/mni/cortex+2mm.nii.gz Label ID's from aparc+aseg to add to cortex mask: 16 16 0 0 0 0 0 0 10 49 0 0 0 0 0 0 0 0 Location of aparc+aseg's relative to base: dlabel/mni/aparc+aseg.nii.gz Brain mask for output subject: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg_mask.nii.gz FA map for output subject: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_FA.nii.gz Affine registration from atlas to base for output subject: /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2diff.bbr.mat Number of control points for initial spline: 6 6 5 5 5 5 7 5 5 5 5 5 4 4 5 5 5 5 Exclude previously chosen center streamlines: 0 Use truncated streamlines: 1 Loading brain mask of output subject from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/aparc+aseg_mask.nii.gz Loading FA map of output subject from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/dtifit_FA.nii.gz Loading affine registration from /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dmri/xfms/mni2diff.bbr.mat Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.cst_AS.bbr.trk INFO: Rejected 1212 streamlines for straying off mask INFO: Rejected 75 streamlines for reversing direction INFO: Rejected 28 streamlines as length outliers INFO: Have 7117 total streamlines (min/mean/max length: 59/98/132) Loading segmentation from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/cortex+2mm.nii.gz Loading segmentation from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/aparc+aseg.nii.gz Loading cortex mask from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/cortex+2mm.nii.gz Processing pathway 1 of 18... Matching streamline ends INFO: Have 4274 non-truncated streamlines (min/mean/max length: 59/99/134) INFO: Center of mass of start points: (97+/-3, 98+/-6, 38+/-13) INFO: Center of mass of midpoints: (111+/-3, 110+/-4, 78+/-7) INFO: Center of mass of end points: (112+/-8, 106+/-9, 140+/-7) INFO: Split streamlines into 26 segments Computing path histograms INFO: Total streamline volume is 37823 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 104 voxels Selecting 6 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0280811 INFO: Points where local peeks in curvature occur are 102 106 55 (curv = 0.0490113) 108 110 65 (curv = 0.03467) 110 110 70 (curv = 0.0351284) 112 111 76 (curv = 0.0386135) 114 110 95 (curv = 0.0355657) 116 109 102 (curv = 0.0527589) 114 105 116 (curv = 0.0327778) 112 104 126 (curv = 0.0528136) INFO: Intermediate dominant points are 100 99 31 102 106 55 112 111 76 116 109 102 112 104 126 114 105 141 INFO: Final dominant points are 100 99 31 102 106 55 112 111 76 116 109 102 112 104 126 114 105 141 WARN: Defaulting to equidistant control points INFO: Selected control points are 100 99 31 100 105 52 111 111 72 114 110 95 114 106 115 114 105 141 INFO: Distances between consecutive points are 22 24 23 20 26 INFO: Selected control points in test subject's space are 135 111 13 136 114 22 146 117 30 149 113 40 149 107 47 149 102 58 INFO: Distances between consecutive points in test subject's space are 10 13 11 9 12 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 101 voxels Selecting 6 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0259949 INFO: Points where local peeks in curvature occur are 100 105 52 (curv = 0.0453045) 108 110 67 (curv = 0.0322705) 111 111 72 (curv = 0.0454267) 115 110 103 (curv = 0.0425632) 114 105 117 (curv = 0.046335) 112 104 128 (curv = 0.054723) INFO: Intermediate dominant points are 100 99 33 100 105 52 111 111 72 114 110 96 112 104 128 115 104 142 INFO: Final dominant points are 100 99 33 100 105 52 111 111 72 114 105 117 112 104 128 115 104 142 WARN: Defaulting to equidistant dominant points INFO: Selected control points are 100 99 33 101 106 54 111 111 74 115 110 97 113 105 119 115 104 142 INFO: Distances between consecutive points are 22 23 23 23 23 INFO: Selected control points in test subject's space are 135 111 13 137 115 23 146 117 31 150 113 40 148 105 49 150 101 58 INFO: Distances between consecutive points in test subject's space are 11 12 11 12 10 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.cst_AS_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.cst_AS_avg33_mni_bbr_cpts_6.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_6.nii.gz Done in 32.187 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.cst_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.cst_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.cst_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.cst_AS.bbr.trk INFO: Rejected 1332 streamlines for straying off mask INFO: Rejected 73 streamlines for reversing direction INFO: Rejected 31 streamlines as length outliers INFO: Have 7860 total streamlines (min/mean/max length: 58/99/141) Processing pathway 2 of 18... Matching streamline ends INFO: Have 4901 non-truncated streamlines (min/mean/max length: 58/99/141) INFO: Center of mass of start points: (82+/-3, 97+/-6, 40+/-15) INFO: Center of mass of midpoints: (68+/-4, 110+/-4, 79+/-8) INFO: Center of mass of end points: (68+/-8, 104+/-11, 141+/-7) INFO: Split streamlines into 25 segments Computing path histograms INFO: Total streamline volume is 44691 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 112 voxels Selecting 6 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0322405 INFO: Points where local peeks in curvature occur are 78 101 60 (curv = 0.0555148) 76 107 64 (curv = 0.068189) 69 111 75 (curv = 0.0519886) 64 111 103 (curv = 0.0532084) 67 107 116 (curv = 0.0326022) 73 104 131 (curv = 0.107053) INFO: Intermediate dominant points are 81 93 29 79 97 53 76 107 64 64 111 103 69 106 121 71 108 143 INFO: Final dominant points are 81 93 29 79 97 53 76 107 64 64 111 103 73 104 131 71 108 143 INFO: Selected control points are 81 93 29 80 95 53 73 108 66 64 111 103 72 104 129 71 108 143 INFO: Distances between consecutive points are 24 20 38 28 15 INFO: Selected control points in test subject's space are 119 106 11 118 104 21 112 114 28 105 112 43 112 102 53 112 104 59 INFO: Distances between consecutive points in test subject's space are 10 14 17 16 6 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.cst_AS_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.cst_AS_avg33_mni_bbr_cpts_6.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_6.nii.gz Done in 37.707 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.ilf_AS.bbr.trk INFO: Rejected 91 streamlines for straying off mask INFO: Rejected 30 streamlines for reversing direction INFO: Rejected 22 streamlines as length outliers INFO: Have 3465 total streamlines (min/mean/max length: 53/90/134) Processing pathway 3 of 18... Matching streamline ends INFO: Have 1424 non-truncated streamlines (min/mean/max length: 53/97/134) INFO: Center of mass of start points: (134+/-8, 137+/-5, 41+/-9) INFO: Center of mass of midpoints: (133+/-4, 103+/-3, 59+/-5) INFO: Center of mass of end points: (115+/-13, 47+/-12, 70+/-13) INFO: Split streamlines into 25 segments Computing path histograms INFO: Total streamline volume is 37800 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 91 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.032025 INFO: Points where local peeks in curvature occur are 132 117 53 (curv = 0.060036) 134 109 56 (curv = 0.0410491) 135 95 59 (curv = 0.0780916) 126 76 69 (curv = 0.0630608) 120 60 69 (curv = 0.0507169) INFO: Intermediate dominant points are 136 136 36 132 117 53 135 95 59 126 76 69 109 48 69 INFO: Final dominant points are 136 136 36 132 117 53 135 95 59 126 76 69 109 48 69 INFO: Selected control points are 136 136 36 132 117 54 134 95 59 127 76 68 109 48 69 INFO: Distances between consecutive points are 26 23 22 33 INFO: Selected control points in test subject's space are 167 145 17 164 125 23 166 105 23 160 86 26 144 60 24 INFO: Distances between consecutive points in test subject's space are 21 20 20 31 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5.nii.gz Done in 8.705 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.ilf_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.ilf_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.ilf_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.ilf_AS.bbr.trk INFO: Rejected 23 streamlines for straying off mask INFO: Rejected 19 streamlines for reversing direction INFO: Rejected 0 streamlines as length outliers INFO: Have 2117 total streamlines (min/mean/max length: 52/92/133) Processing pathway 4 of 18... Matching streamline ends INFO: Have 970 non-truncated streamlines (min/mean/max length: 57/100/124) INFO: Center of mass of start points: (46+/-8, 140+/-6, 42+/-9) INFO: Center of mass of midpoints: (47+/-3, 105+/-2, 58+/-4) INFO: Center of mass of end points: (65+/-12, 46+/-11, 73+/-11) INFO: Split streamlines into 25 segments Computing path histograms INFO: Total streamline volume is 28860 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 103 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0317225 INFO: Points where local peeks in curvature occur are 46 118 50 (curv = 0.0388051) 48 111 56 (curv = 0.0555527) 48 104 60 (curv = 0.0505194) 47 97 60 (curv = 0.0628071) 60 66 75 (curv = 0.0333833) INFO: Intermediate dominant points are 41 137 39 46 118 50 47 97 60 60 66 75 71 41 64 INFO: Final dominant points are 41 137 39 46 118 50 47 97 60 60 66 75 71 41 64 WARN: Defaulting to equidistant control points INFO: Selected control points are 41 137 39 48 112 56 49 87 66 61 63 75 71 41 64 INFO: Distances between consecutive points are 31 27 28 27 INFO: Selected control points in test subject's space are 84 144 19 90 119 24 91 95 26 102 72 28 111 54 22 INFO: Distances between consecutive points in test subject's space are 26 24 26 21 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 107 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 14 INFO: Minimum allowable curvature at a dominant point is 0.0281989 INFO: Points where local peeks in curvature occur are 46 124 49 (curv = 0.0525813) 47 86 64 (curv = 0.0457634) 55 75 71 (curv = 0.0579393) 59 65 73 (curv = 0.0398178) 67 57 74 (curv = 0.0410269) INFO: Intermediate dominant points are 46 146 43 46 124 49 45 97 60 55 75 71 76 42 76 INFO: Final dominant points are 46 146 43 46 124 49 46 90 62 55 75 71 76 42 76 WARN: Defaulting to equidistant control points INFO: Selected control points are 46 146 43 46 124 49 45 98 59 57 71 72 76 42 76 INFO: Distances between consecutive points are 23 28 32 35 INFO: Selected control points in test subject's space are 88 151 22 88 131 22 88 106 24 99 80 27 115 53 27 INFO: Distances between consecutive points in test subject's space are 20 25 28 31 WARN: Could not find satisfactory control point fit - try 2 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 103 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0323469 INFO: Points where local peeks in curvature occur are 49 130 44 (curv = 0.0612801) 48 126 50 (curv = 0.0393571) 48 113 58 (curv = 0.0660797) 44 97 61 (curv = 0.0718496) 45 90 63 (curv = 0.0473725) 56 74 73 (curv = 0.0609765) 60 64 74 (curv = 0.0331985) INFO: Intermediate dominant points are 48 145 41 49 130 44 44 97 61 56 74 73 76 42 76 INFO: Final dominant points are 48 145 41 49 130 44 44 97 61 56 74 73 76 42 76 WARN: Defaulting to equidistant control points INFO: Selected control points are 48 145 41 48 123 52 44 97 61 57 71 73 76 42 76 INFO: Distances between consecutive points are 25 28 31 35 INFO: Selected control points in test subject's space are 90 151 21 90 129 23 87 104 25 99 80 28 115 53 27 INFO: Distances between consecutive points in test subject's space are 22 25 27 31 WARN: Could not find satisfactory control point fit - try 3 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 104 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.032913 INFO: Points where local peeks in curvature occur are 49 131 44 (curv = 0.0580746) 48 114 58 (curv = 0.0639599) 44 97 61 (curv = 0.0728882) 46 88 64 (curv = 0.0464374) 56 74 73 (curv = 0.0419059) 59 67 73 (curv = 0.0474898) 66 58 74 (curv = 0.042791) INFO: Intermediate dominant points are 48 145 41 49 131 44 44 97 61 59 67 73 76 42 76 INFO: Final dominant points are 48 145 41 49 131 44 44 97 61 59 67 73 76 42 76 WARN: Defaulting to equidistant control points INFO: Selected control points are 48 145 41 48 123 52 44 97 61 58 70 73 76 42 76 INFO: Distances between consecutive points are 25 28 33 33 INFO: Selected control points in test subject's space are 90 151 21 90 129 23 87 104 25 99 79 28 115 53 27 INFO: Distances between consecutive points in test subject's space are 22 25 28 31 WARN: Could not find satisfactory control point fit - try 4 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 103 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0330161 INFO: Points where local peeks in curvature occur are 48 130 43 (curv = 0.0477155) 47 123 49 (curv = 0.0487921) 45 116 52 (curv = 0.0594563) 46 109 56 (curv = 0.052095) 45 104 58 (curv = 0.0485911) 49 84 64 (curv = 0.0452784) 56 75 72 (curv = 0.0471211) INFO: Intermediate dominant points are 47 145 41 45 116 52 46 96 60 56 75 72 74 43 79 INFO: Final dominant points are 47 145 41 45 116 52 47 89 63 56 75 72 74 43 79 WARN: Defaulting to equidistant control points INFO: Selected control points are 47 145 41 47 122 50 46 97 60 58 71 73 74 43 79 INFO: Distances between consecutive points are 25 27 31 33 INFO: Selected control points in test subject's space are 89 151 21 89 129 23 89 105 25 99 80 28 114 54 28 INFO: Distances between consecutive points in test subject's space are 22 24 27 30 WARN: Could not find satisfactory control point fit - try 5 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 99 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0330215 INFO: Points where local peeks in curvature occur are 47 130 47 (curv = 0.0693609) 49 116 57 (curv = 0.0845046) 48 109 57 (curv = 0.040301) 47 102 59 (curv = 0.0437753) 48 88 65 (curv = 0.053778) 57 67 72 (curv = 0.0353276) INFO: Intermediate dominant points are 41 145 49 49 116 57 48 88 65 57 67 72 61 50 72 INFO: Final dominant points are 41 145 49 49 116 57 48 88 65 57 67 72 61 50 72 WARN: Defaulting to equidistant control points INFO: Selected control points are 41 145 49 48 122 53 47 99 60 54 76 70 61 50 72 INFO: Distances between consecutive points are 24 24 26 27 INFO: Selected control points in test subject's space are 84 149 24 90 128 24 89 106 25 96 84 27 102 61 26 INFO: Distances between consecutive points in test subject's space are 22 22 23 24 WARN: Could not find satisfactory control point fit - try 6 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 97 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0267388 INFO: Points where local peeks in curvature occur are 47 129 47 (curv = 0.0624221) 49 118 56 (curv = 0.0769472) 48 106 59 (curv = 0.0335264) 48 89 65 (curv = 0.0476719) 55 73 71 (curv = 0.0312977) INFO: Intermediate dominant points are 40 145 49 49 118 56 48 89 65 55 73 71 63 51 72 INFO: Final dominant points are 40 145 49 49 118 56 48 89 65 55 73 71 63 51 72 INFO: Selected control points are 40 145 49 49 117 54 48 90 66 55 73 71 63 51 72 INFO: Distances between consecutive points are 30 30 19 23 INFO: Selected control points in test subject's space are 83 149 24 91 124 24 91 97 27 97 82 27 104 62 26 INFO: Distances between consecutive points in test subject's space are 26 27 16 21 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5.nii.gz Done in 5.551 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.unc_AS.bbr.trk INFO: Rejected 130 streamlines for straying off mask INFO: Rejected 15 streamlines for reversing direction INFO: Rejected 0 streamlines as length outliers INFO: Have 5149 total streamlines (min/mean/max length: 8/55/104) Processing pathway 5 of 18... Matching streamline ends INFO: Have 4120 non-truncated streamlines (min/mean/max length: 8/56/98) INFO: Center of mass of start points: (128+/-6, 143+/-3, 41+/-5) INFO: Center of mass of midpoints: (125+/-2, 126+/-2, 55+/-3) INFO: Center of mass of end points: (113+/-11, 153+/-16, 58+/-5) INFO: Split streamlines into 10 segments Computing path histograms INFO: Total streamline volume is 20893 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 68 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 9 INFO: Minimum allowable curvature at a dominant point is 0.0689837 INFO: Points where local peeks in curvature occur are 126 124 54 (curv = 0.148395) 124 130 60 (curv = 0.100467) 109 153 61 (curv = 0.0751884) INFO: Intermediate dominant points are 125 145 40 126 124 54 123 133 61 109 153 61 107 166 56 INFO: Final dominant points are 125 145 40 126 124 54 114 144 59 109 153 61 107 166 56 INFO: Selected control points are 125 145 40 128 125 53 115 144 61 109 152 60 107 166 56 INFO: Distances between consecutive points are 24 24 10 15 INFO: Selected control points in test subject's space are 157 152 20 160 132 23 149 148 28 143 156 29 142 169 28 INFO: Distances between consecutive points in test subject's space are 20 20 10 13 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.unc_AS_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.unc_AS_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5.nii.gz Done in 8.778 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.unc_AS.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.unc_AS_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.unc_AS_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.unc_AS.bbr.trk INFO: Rejected 241 streamlines for straying off mask INFO: Rejected 112 streamlines for reversing direction INFO: Rejected 0 streamlines as length outliers INFO: Have 6568 total streamlines (min/mean/max length: 8/62/107) Processing pathway 6 of 18... Matching streamline ends INFO: Have 4363 non-truncated streamlines (min/mean/max length: 8/60/107) INFO: Center of mass of start points: (53+/-6, 145+/-4, 41+/-5) INFO: Center of mass of midpoints: (55+/-2, 127+/-3, 55+/-3) INFO: Center of mass of end points: (70+/-9, 160+/-17, 57+/-4) INFO: Split streamlines into 10 segments Computing path histograms INFO: Total streamline volume is 25040 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 76 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0632381 INFO: Points where local peeks in curvature occur are 51 132 44 (curv = 0.103769) 54 127 53 (curv = 0.132173) 72 153 61 (curv = 0.115048) 74 157 59 (curv = 0.063488) INFO: Intermediate dominant points are 49 149 44 54 127 53 62 138 60 72 153 61 76 176 55 INFO: Final dominant points are 49 149 44 54 127 53 66 142 60 72 153 61 76 176 55 WARN: Defaulting to equidistant control points INFO: Selected control points are 49 149 44 52 131 45 61 136 60 73 155 60 76 176 55 INFO: Distances between consecutive points are 18 18 22 22 INFO: Selected control points in test subject's space are 91 154 22 93 137 21 102 140 28 112 158 29 114 177 29 INFO: Distances between consecutive points in test subject's space are 17 12 21 19 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 74 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0669941 INFO: Points where local peeks in curvature occur are 52 135 43 (curv = 0.0687635) 55 128 53 (curv = 0.157154) 72 152 62 (curv = 0.0876863) INFO: Intermediate dominant points are 50 148 42 55 128 53 62 138 60 72 152 62 76 176 55 INFO: Final dominant points are 50 148 42 55 128 53 65 141 60 72 152 62 76 176 55 INFO: Selected control points are 50 148 42 55 127 51 65 141 61 73 152 60 76 176 55 INFO: Distances between consecutive points are 23 20 14 25 INFO: Selected control points in test subject's space are 92 153 21 96 133 23 105 145 28 112 155 29 114 177 29 INFO: Distances between consecutive points in test subject's space are 20 16 12 22 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.unc_AS_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.unc_AS_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5.nii.gz Done in 18.759 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/fmajor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/fmajor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/fmajor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/fmajor_PP.bbr.trk INFO: Rejected 1933 streamlines for straying off mask INFO: Rejected 229 streamlines for reversing direction INFO: Rejected 134 streamlines as length outliers INFO: Have 7479 total streamlines (min/mean/max length: 88/134/168) Processing pathway 7 of 18... Matching streamline ends INFO: Have 5321 non-truncated streamlines (min/mean/max length: 88/135/171) INFO: Center of mass of start points: (102+/-7, 38+/-8, 99+/-16) INFO: Center of mass of midpoints: (90+/-3, 90+/-3, 84+/-3) INFO: Center of mass of end points: (74+/-6, 39+/-8, 99+/-17) INFO: Split streamlines into 36 segments Computing path histograms INFO: Total streamline volume is 64709 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 144 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0541086 INFO: Points where local peeks in curvature occur are 110 46 91 (curv = 0.111307) 119 65 89 (curv = 0.125989) 61 66 88 (curv = 0.117888) 71 47 89 (curv = 0.0779223) INFO: Intermediate dominant points are 104 42 111 110 46 91 119 65 89 89 89 83 61 66 88 71 47 89 78 39 114 INFO: Final dominant points are 104 42 111 110 46 91 119 65 89 71 79 86 61 66 88 71 47 89 78 39 114 WARN: Defaulting to equidistant control points INFO: Selected control points are 104 42 111 112 49 89 113 73 87 92 89 83 69 77 86 68 52 87 78 39 114 INFO: Distances between consecutive points are 24 24 27 26 25 32 INFO: Selected control points in test subject's space are 140 49 41 147 59 32 148 81 33 129 95 33 109 83 34 109 61 32 118 45 42 INFO: Distances between consecutive points in test subject's space are 15 22 24 23 22 21 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 144 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0491551 INFO: Points where local peeks in curvature occur are 111 49 87 (curv = 0.107178) 118 64 87 (curv = 0.111705) 89 91 83 (curv = 0.0608033) 83 90 83 (curv = 0.0511514) 62 66 87 (curv = 0.112736) 68 52 86 (curv = 0.0776407) 71 47 89 (curv = 0.0644977) 76 40 100 (curv = 0.0587741) INFO: Intermediate dominant points are 105 42 106 118 64 87 111 78 83 89 91 83 62 66 87 71 47 89 77 39 114 INFO: Final dominant points are 105 42 106 118 64 87 101 88 83 89 91 83 62 66 87 71 47 89 77 39 114 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 42 106 113 52 87 112 76 84 90 91 83 67 76 86 68 52 86 77 39 114 INFO: Distances between consecutive points are 23 24 27 28 24 32 INFO: Selected control points in test subject's space are 141 50 39 148 62 32 147 84 32 128 97 33 108 82 33 109 61 32 117 45 42 INFO: Distances between consecutive points in test subject's space are 16 22 23 25 21 20 WARN: Could not find satisfactory control point fit - try 2 Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 147 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0501929 INFO: Points where local peeks in curvature occur are 108 40 83 (curv = 0.114651) 117 59 85 (curv = 0.0737284) 94 91 84 (curv = 0.0845088) 92 91 84 (curv = 0.0845611) 87 91 85 (curv = 0.0643188) 60 64 87 (curv = 0.121734) 62 55 87 (curv = 0.0678002) 65 51 89 (curv = 0.0713952) INFO: Intermediate dominant points are 105 33 103 108 40 83 117 59 85 92 91 84 60 64 87 66 50 90 73 43 114 INFO: Final dominant points are 105 33 103 108 40 83 117 59 85 92 91 84 60 64 87 71 45 101 73 43 114 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 33 103 112 46 82 112 70 87 94 91 84 69 77 88 64 52 88 73 43 114 INFO: Distances between consecutive points are 26 25 28 29 25 29 INFO: Selected control points in test subject's space are 141 42 37 147 57 29 147 78 33 131 97 34 109 83 34 105 60 32 113 49 42 INFO: Distances between consecutive points in test subject's space are 18 21 25 26 23 17 WARN: Could not find satisfactory control point fit - try 3 Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 134 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0515942 INFO: Points where local peeks in curvature occur are 111 47 89 (curv = 0.108254) 118 65 88 (curv = 0.129252) 82 88 84 (curv = 0.0580786) 61 67 87 (curv = 0.11257) 68 48 85 (curv = 0.100783) INFO: Intermediate dominant points are 100 41 113 111 47 89 118 65 88 95 89 83 82 88 84 61 67 87 71 37 97 INFO: Final dominant points are 100 41 113 113 52 87 118 65 88 95 89 83 82 88 84 61 67 87 71 37 97 WARN: Defaulting to equidistant control points INFO: Selected control points are 100 41 113 110 46 90 116 69 87 96 89 83 72 82 85 62 60 86 71 37 97 INFO: Distances between consecutive points are 26 24 29 25 24 27 INFO: Selected control points in test subject's space are 137 48 42 145 56 32 150 77 33 133 95 33 112 88 34 103 68 32 111 46 35 INFO: Distances between consecutive points in test subject's space are 15 22 25 22 22 24 WARN: Could not find satisfactory control point fit - try 4 Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 135 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0507905 INFO: Points where local peeks in curvature occur are 112 49 88 (curv = 0.120098) 118 65 89 (curv = 0.101834) 93 90 84 (curv = 0.0560339) 81 89 84 (curv = 0.06498) 61 66 87 (curv = 0.108146) INFO: Intermediate dominant points are 104 41 112 112 49 88 113 73 87 93 90 84 81 89 84 61 66 87 71 37 97 INFO: Final dominant points are 104 41 112 112 49 88 106 83 84 93 90 84 81 89 84 61 66 87 71 37 97 WARN: Defaulting to equidistant control points INFO: Selected control points are 104 41 112 111 48 88 114 72 87 94 90 84 72 83 85 62 61 86 71 37 97 INFO: Distances between consecutive points are 26 24 27 23 24 28 INFO: Selected control points in test subject's space are 140 48 41 146 58 32 149 80 33 131 96 34 112 89 34 103 69 32 111 46 35 INFO: Distances between consecutive points in test subject's space are 15 22 24 20 22 25 WARN: Could not find satisfactory control point fit - try 5 Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 136 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0627143 INFO: Points where local peeks in curvature occur are 109 50 84 (curv = 0.122541) 115 57 85 (curv = 0.0973751) 90 92 84 (curv = 0.107346) 62 67 90 (curv = 0.0819989) 62 61 87 (curv = 0.0683737) 71 47 82 (curv = 0.157138) INFO: Intermediate dominant points are 97 41 104 109 50 84 107 76 85 90 92 84 62 67 90 71 47 82 70 38 99 INFO: Final dominant points are 97 41 104 109 50 84 102 84 85 90 92 84 62 67 90 71 47 82 70 38 99 WARN: Defaulting to equidistant control points INFO: Selected control points are 97 41 104 110 51 83 108 75 86 89 92 84 68 78 89 65 55 84 70 38 99 INFO: Distances between consecutive points are 27 24 26 26 24 23 INFO: Selected control points in test subject's space are 134 49 38 145 61 30 143 82 33 127 98 34 108 84 35 106 64 31 111 46 36 INFO: Distances between consecutive points in test subject's space are 18 21 23 24 20 19 WARN: Could not find satisfactory control point fit - try 6 Finding center streamline INFO: Step is 7 voxels INFO: Length of center streamline is 138 voxels Selecting 7 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0588973 INFO: Points where local peeks in curvature occur are 111 53 85 (curv = 0.114369) 114 60 86 (curv = 0.118652) 89 92 84 (curv = 0.106758) 66 73 91 (curv = 0.0678607) 62 63 89 (curv = 0.0939204) 72 47 85 (curv = 0.178538) INFO: Intermediate dominant points are 98 43 105 114 60 86 105 79 84 89 92 84 66 73 91 72 47 85 79 42 109 INFO: Final dominant points are 98 43 105 114 60 86 101 85 84 89 92 84 66 73 91 72 47 85 79 42 109 INFO: Selected control points are 98 43 105 113 59 85 102 84 86 88 92 83 64 73 90 70 48 86 79 42 109 INFO: Distances between consecutive points are 30 27 16 31 26 25 INFO: Selected control points in test subject's space are 135 51 38 148 68 31 138 90 34 126 98 33 105 79 35 110 57 31 119 49 40 INFO: Distances between consecutive points in test subject's space are 23 24 14 28 23 15 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/fmajor_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/fmajor_PP_avg33_mni_bbr_cpts_7.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_7.nii.gz Done in 43.864 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/fminor_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/fminor_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/fminor_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/fminor_PP.bbr.trk INFO: Rejected 1148 streamlines for straying off mask INFO: Rejected 285 streamlines for reversing direction INFO: Rejected 54 streamlines as length outliers INFO: Have 26140 total streamlines (min/mean/max length: 49/90/119) Processing pathway 8 of 18... Matching streamline ends INFO: Have 18640 non-truncated streamlines (min/mean/max length: 52/90/121) INFO: Center of mass of start points: (103+/-5, 187+/-6, 75+/-12) INFO: Center of mass of midpoints: (90+/-2, 150+/-4, 76+/-3) INFO: Center of mass of end points: (78+/-5, 188+/-6, 76+/-11) INFO: Split streamlines into 24 segments Computing path histograms INFO: Total streamline volume is 66382 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 98 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0614809 INFO: Points where local peeks in curvature occur are 108 175 68 (curv = 0.0860874) 108 168 71 (curv = 0.0791179) 101 154 73 (curv = 0.0702093) 88 150 74 (curv = 0.0734746) 76 155 71 (curv = 0.0763106) 74 168 68 (curv = 0.105297) INFO: Intermediate dominant points are 105 192 69 108 175 68 101 154 73 74 168 68 80 194 85 INFO: Final dominant points are 105 192 69 108 175 68 101 154 73 74 168 68 80 194 85 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 192 69 108 166 71 89 150 74 74 168 68 80 194 85 INFO: Distances between consecutive points are 26 25 24 32 INFO: Selected control points in test subject's space are 140 190 35 143 167 34 126 151 34 113 168 33 118 190 42 INFO: Distances between consecutive points in test subject's space are 23 23 21 24 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 97 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0615708 INFO: Points where local peeks in curvature occur are 108 175 67 (curv = 0.113044) 108 167 71 (curv = 0.0627896) 104 157 72 (curv = 0.0701494) 89 150 74 (curv = 0.0916397) 73 168 69 (curv = 0.106445) INFO: Intermediate dominant points are 105 193 68 108 175 67 89 150 74 73 168 69 82 190 82 INFO: Final dominant points are 105 193 68 108 175 67 89 150 74 73 168 69 82 190 82 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 193 68 108 169 70 91 150 74 73 166 69 82 190 82 INFO: Distances between consecutive points are 24 26 25 29 INFO: Selected control points in test subject's space are 140 191 35 143 170 34 128 151 34 112 166 34 120 186 41 INFO: Distances between consecutive points in test subject's space are 21 24 22 23 WARN: Could not find satisfactory control point fit - try 2 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 97 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0603825 INFO: Points where local peeks in curvature occur are 108 177 69 (curv = 0.0756102) 109 166 72 (curv = 0.0671503) 97 151 74 (curv = 0.073099) 89 149 74 (curv = 0.081239) 75 155 69 (curv = 0.0923906) 75 165 66 (curv = 0.121383) INFO: Intermediate dominant points are 105 192 70 108 177 69 97 151 74 75 165 66 82 191 82 INFO: Final dominant points are 105 192 70 108 177 69 97 151 74 75 165 66 82 191 82 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 192 70 108 165 72 89 149 74 75 166 67 82 191 82 INFO: Distances between consecutive points are 27 25 23 30 INFO: Selected control points in test subject's space are 140 190 36 143 166 34 126 151 34 114 167 33 120 187 41 INFO: Distances between consecutive points in test subject's space are 24 23 20 22 WARN: Could not find satisfactory control point fit - try 3 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 99 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.0590364 INFO: Points where local peeks in curvature occur are 108 175 69 (curv = 0.0698797) 109 170 71 (curv = 0.0651808) 97 151 74 (curv = 0.0667855) 89 149 74 (curv = 0.081239) 76 154 69 (curv = 0.0829061) 74 159 68 (curv = 0.0882833) 75 165 66 (curv = 0.106987) INFO: Intermediate dominant points are 105 191 70 108 175 69 97 151 74 75 165 66 82 191 82 INFO: Final dominant points are 105 191 70 108 175 69 97 151 74 75 165 66 82 191 82 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 191 70 109 166 71 90 149 74 75 165 66 82 191 82 INFO: Distances between consecutive points are 25 26 23 31 INFO: Selected control points in test subject's space are 140 189 36 144 167 34 127 151 34 114 166 32 120 187 41 INFO: Distances between consecutive points in test subject's space are 22 23 20 24 WARN: Could not find satisfactory control point fit - try 4 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 81 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0584377 INFO: Points where local peeks in curvature occur are 109 174 72 (curv = 0.103411) 91 153 76 (curv = 0.0815859) 82 155 76 (curv = 0.0604309) 77 158 74 (curv = 0.0703064) 72 169 72 (curv = 0.0775332) 74 180 72 (curv = 0.0739761) INFO: Intermediate dominant points are 108 184 77 106 164 73 91 153 76 72 169 72 76 190 80 INFO: Final dominant points are 108 184 77 102 158 75 91 153 76 72 169 72 76 190 80 WARN: Defaulting to equidistant control points INFO: Selected control points are 108 184 77 106 164 73 87 153 76 72 169 72 76 190 80 INFO: Distances between consecutive points are 20 22 22 23 INFO: Selected control points in test subject's space are 143 182 38 141 165 35 124 154 35 111 169 35 115 187 40 INFO: Distances between consecutive points in test subject's space are 17 20 20 19 WARN: Could not find satisfactory control point fit - try 5 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 82 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0607508 INFO: Points where local peeks in curvature occur are 108 171 71 (curv = 0.0852097) 104 160 69 (curv = 0.0817238) 92 153 74 (curv = 0.0813576) 70 173 69 (curv = 0.121901) INFO: Intermediate dominant points are 101 188 79 108 171 71 90 153 74 70 173 69 73 187 76 INFO: Final dominant points are 101 188 79 108 171 71 74 161 70 70 173 69 73 187 76 WARN: Defaulting to equidistant control points INFO: Selected control points are 101 188 79 107 167 71 91 153 74 72 165 70 73 187 76 INFO: Distances between consecutive points are 23 21 23 23 INFO: Selected control points in test subject's space are 137 185 39 142 168 34 128 154 34 111 165 34 112 184 38 INFO: Distances between consecutive points in test subject's space are 18 20 20 19 WARN: Could not find satisfactory control point fit - try 6 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 107 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 14 INFO: Minimum allowable curvature at a dominant point is 0.0544979 INFO: Points where local peeks in curvature occur are 106 185 72 (curv = 0.0883987) 110 166 72 (curv = 0.0667013) 91 147 75 (curv = 0.0706169) 77 151 72 (curv = 0.0665991) 74 154 70 (curv = 0.0630468) 72 160 69 (curv = 0.0717746) 73 170 68 (curv = 0.101813) INFO: Intermediate dominant points are 103 193 74 110 166 72 95 148 75 73 170 68 79 189 75 INFO: Final dominant points are 103 193 74 110 166 72 73 156 70 73 170 68 79 189 75 WARN: Defaulting to equidistant control points INFO: Selected control points are 103 193 74 110 172 71 96 148 75 72 159 69 79 189 75 INFO: Distances between consecutive points are 22 28 27 31 INFO: Selected control points in test subject's space are 138 191 38 144 172 35 132 150 34 111 160 33 117 186 38 INFO: Distances between consecutive points in test subject's space are 20 25 23 27 WARN: Could not find satisfactory control point fit - try 7 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 84 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0641143 INFO: Points where local peeks in curvature occur are 110 172 73 (curv = 0.10578) 99 155 74 (curv = 0.065445) 95 154 75 (curv = 0.0786246) 82 154 73 (curv = 0.0829692) 73 162 71 (curv = 0.0764544) 71 171 70 (curv = 0.102849) INFO: Intermediate dominant points are 107 186 73 110 172 73 82 154 73 71 171 70 81 183 82 INFO: Final dominant points are 107 186 73 110 172 73 82 154 73 71 171 70 81 183 82 WARN: Defaulting to equidistant control points INFO: Selected control points are 107 186 73 107 164 74 89 154 74 72 166 70 81 183 82 INFO: Distances between consecutive points are 22 21 21 23 INFO: Selected control points in test subject's space are 142 185 37 142 164 35 126 155 35 111 166 34 119 180 40 INFO: Distances between consecutive points in test subject's space are 21 18 19 17 WARN: Could not find satisfactory control point fit - try 8 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 83 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0602598 INFO: Points where local peeks in curvature occur are 109 170 72 (curv = 0.0989783) 100 157 75 (curv = 0.061191) 92 154 76 (curv = 0.0705818) 83 155 75 (curv = 0.0825147) INFO: Intermediate dominant points are 104 183 86 109 170 72 83 155 75 73 167 72 75 186 72 INFO: Final dominant points are 104 183 86 109 170 72 83 155 75 73 176 71 75 186 72 WARN: Defaulting to equidistant control points INFO: Selected control points are 104 183 86 109 171 72 93 154 76 74 165 72 75 186 72 INFO: Distances between consecutive points are 19 24 22 21 INFO: Selected control points in test subject's space are 139 180 42 144 171 35 130 155 35 113 165 35 114 184 36 INFO: Distances between consecutive points in test subject's space are 12 21 20 19 WARN: Could not find satisfactory control point fit - try 9 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 88 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0556112 INFO: Points where local peeks in curvature occur are 107 175 70 (curv = 0.0662514) 106 166 70 (curv = 0.0599513) 95 154 75 (curv = 0.0717856) 87 153 75 (curv = 0.0814295) 76 159 73 (curv = 0.0771179) 73 171 70 (curv = 0.0569844) INFO: Intermediate dominant points are 102 190 75 107 175 70 87 153 75 73 171 70 79 191 69 INFO: Final dominant points are 102 190 75 107 175 70 87 153 75 73 171 70 79 191 69 INFO: Selected control points are 102 190 75 109 173 70 88 152 75 72 171 70 79 191 69 INFO: Distances between consecutive points are 19 30 25 21 INFO: Selected control points in test subject's space are 137 188 38 144 173 34 125 153 35 111 171 34 117 189 36 INFO: Distances between consecutive points in test subject's space are 17 28 23 19 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/fminor_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/fminor_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 297.427 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.atr_PP.bbr.trk INFO: Rejected 294 streamlines for straying off mask INFO: Rejected 6 streamlines for reversing direction INFO: Rejected 47 streamlines as length outliers INFO: Have 13232 total streamlines (min/mean/max length: 30/60/94) Processing pathway 9 of 18... Matching streamline ends INFO: Have 5030 non-truncated streamlines (min/mean/max length: 37/68/92) INFO: Center of mass of start points: (116+/-12, 180+/-10, 75+/-13) INFO: Center of mass of midpoints: (106+/-3, 134+/-2, 80+/-6) INFO: Center of mass of end points: (97+/-3, 114+/-3, 78+/-6) INFO: Split streamlines into 17 segments Computing path histograms INFO: Total streamline volume is 42339 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 69 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 9 INFO: Minimum allowable curvature at a dominant point is 0.0492409 INFO: Points where local peeks in curvature occur are 110 177 72 (curv = 0.092235) 114 169 75 (curv = 0.141218) 111 159 74 (curv = 0.054827) 110 142 79 (curv = 0.0746263) INFO: Intermediate dominant points are 107 186 78 114 169 75 111 152 77 110 142 79 98 116 78 INFO: Final dominant points are 107 186 78 114 169 75 111 152 77 110 142 79 98 116 78 INFO: Selected control points are 107 186 78 113 169 73 111 152 77 109 142 78 98 116 78 INFO: Distances between consecutive points are 19 18 10 28 INFO: Selected control points in test subject's space are 142 184 39 147 169 35 145 153 35 144 144 35 134 120 33 INFO: Distances between consecutive points in test subject's space are 16 16 9 26 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.atr_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.atr_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 60.609 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.atr_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.atr_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.atr_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.atr_PP.bbr.trk INFO: Rejected 153 streamlines for straying off mask INFO: Rejected 18 streamlines for reversing direction INFO: Rejected 34 streamlines as length outliers INFO: Have 11807 total streamlines (min/mean/max length: 31/63/91) Processing pathway 10 of 18... Matching streamline ends INFO: Have 5407 non-truncated streamlines (min/mean/max length: 41/71/91) INFO: Center of mass of start points: (68+/-9, 185+/-9, 81+/-11) INFO: Center of mass of midpoints: (72+/-3, 135+/-3, 81+/-5) INFO: Center of mass of end points: (82+/-2, 114+/-4, 78+/-6) INFO: Split streamlines into 18 segments Computing path histograms INFO: Total streamline volume is 37783 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 4 voxels INFO: Length of center streamline is 82 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0448727 INFO: Points where local peeks in curvature occur are 66 165 77 (curv = 0.10676) 70 153 77 (curv = 0.080488) 70 139 83 (curv = 0.0795153) INFO: Intermediate dominant points are 68 192 84 66 165 77 70 150 79 70 139 83 80 111 77 INFO: Final dominant points are 68 192 84 66 165 77 70 150 79 70 139 83 80 111 77 INFO: Selected control points are 68 192 84 67 165 77 70 150 79 71 139 83 80 111 77 INFO: Distances between consecutive points are 28 15 12 30 INFO: Selected control points in test subject's space are 108 188 42 107 164 37 110 150 36 111 140 37 119 116 32 INFO: Distances between consecutive points in test subject's space are 25 14 10 26 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.atr_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.atr_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 45.043 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.ccg_PP.bbr.trk INFO: Rejected 16 streamlines for straying off mask INFO: Rejected 0 streamlines for reversing direction INFO: Rejected 1 streamlines as length outliers INFO: Have 5261 total streamlines (min/mean/max length: 25/68/135) Processing pathway 11 of 18... Matching streamline ends INFO: Have 1476 non-truncated streamlines (min/mean/max length: 55/86/135) INFO: Center of mass of start points: (99+/-4, 80+/-7, 103+/-7) INFO: Center of mass of midpoints: (96+/-2, 124+/-2, 105+/-2) INFO: Center of mass of end points: (97+/-5, 163+/-7, 86+/-8) INFO: Split streamlines into 22 segments Computing path histograms INFO: Total streamline volume is 20164 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 4 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0242846 INFO: Points where local peeks in curvature occur are 99 92 103 (curv = 0.0317396) 96 102 105 (curv = 0.0474075) 96 110 106 (curv = 0.0279286) 97 113 106 (curv = 0.0272309) 97 120 106 (curv = 0.0265721) 97 129 104 (curv = 0.0269178) 97 143 98 (curv = 0.0305111) 96 146 97 (curv = 0.0288442) 96 155 91 (curv = 0.0338547) INFO: Intermediate dominant points are 101 74 96 96 102 105 97 122 106 97 143 98 97 163 79 INFO: Final dominant points are 101 74 96 96 102 105 97 131 104 97 143 98 97 163 79 INFO: Selected control points are 101 74 96 97 102 106 97 130 104 96 143 100 97 163 79 INFO: Distances between consecutive points are 30 28 14 29 INFO: Selected control points in test subject's space are 137 80 37 134 104 44 134 129 45 133 142 44 133 163 37 INFO: Distances between consecutive points in test subject's space are 25 25 13 22 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 11.427 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.ccg_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.ccg_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.ccg_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.ccg_PP.bbr.trk INFO: Rejected 27 streamlines for straying off mask INFO: Rejected 8 streamlines for reversing direction INFO: Rejected 43 streamlines as length outliers INFO: Have 4344 total streamlines (min/mean/max length: 30/66/116) Processing pathway 12 of 18... Matching streamline ends INFO: Have 929 non-truncated streamlines (min/mean/max length: 56/83/119) INFO: Center of mass of start points: (81+/-4, 81+/-7, 99+/-9) INFO: Center of mass of midpoints: (83+/-1, 125+/-2, 106+/-2) INFO: Center of mass of end points: (83+/-4, 160+/-6, 89+/-8) INFO: Split streamlines into 22 segments Computing path histograms INFO: Total streamline volume is 19137 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 4 voxels INFO: Length of center streamline is 80 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0293551 INFO: Points where local peeks in curvature occur are 83 107 107 (curv = 0.0460433) 83 121 107 (curv = 0.0398419) 83 124 106 (curv = 0.0366825) 83 139 99 (curv = 0.0407851) 79 151 93 (curv = 0.0987555) INFO: Intermediate dominant points are 80 82 99 83 107 107 83 123 106 79 151 93 86 162 94 INFO: Final dominant points are 80 82 99 83 107 107 82 141 98 79 151 93 86 162 94 INFO: Selected control points are 80 82 99 82 108 108 83 140 99 78 151 92 86 162 94 INFO: Distances between consecutive points are 28 33 14 14 INFO: Selected control points in test subject's space are 119 86 39 121 109 45 121 139 44 117 150 42 124 160 43 INFO: Distances between consecutive points in test subject's space are 24 30 12 12 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 7.732 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.cab_PP.bbr.trk INFO: Rejected 81 streamlines for straying off mask INFO: Rejected 63 streamlines for reversing direction INFO: Rejected 0 streamlines as length outliers INFO: Have 4117 total streamlines (min/mean/max length: 2/45/95) Processing pathway 13 of 18... Matching streamline ends INFO: Have 1350 non-truncated streamlines (min/mean/max length: 17/53/89) INFO: Center of mass of start points: (109+/-6, 81+/-12, 75+/-13) INFO: Center of mass of midpoints: (111+/-2, 99+/-4, 58+/-5) INFO: Center of mass of end points: (115+/-5, 122+/-13, 42+/-11) INFO: Split streamlines into 12 segments Computing path histograms INFO: Total streamline volume is 17627 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 64 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0346547 INFO: Points where local peeks in curvature occur are 114 104 48 (curv = 0.0431092) 120 114 42 (curv = 0.105698) INFO: Intermediate dominant points are 110 72 86 109 89 66 120 114 42 116 129 40 INFO: Final dominant points are 110 72 86 113 103 49 120 114 42 116 129 40 WARN: Defaulting to equidistant control points INFO: Selected control points are 110 72 86 109 89 66 116 107 46 116 129 40 INFO: Distances between consecutive points are 26 28 23 INFO: Selected control points in test subject's space are 145 80 33 144 98 26 150 117 19 149 138 19 INFO: Distances between consecutive points in test subject's space are 19 21 21 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 58 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0243762 INFO: Points where local peeks in curvature occur are 116 113 45 (curv = 0.0532996) INFO: Intermediate dominant points are 105 80 76 110 97 60 116 113 45 116 132 33 INFO: Final dominant points are 105 80 76 113 104 53 116 113 45 116 132 33 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 80 76 110 97 60 116 114 44 116 132 33 INFO: Distances between consecutive points are 24 24 21 INFO: Selected control points in test subject's space are 141 88 29 145 106 24 150 123 19 149 141 16 INFO: Distances between consecutive points in test subject's space are 19 18 18 WARN: Could not find satisfactory control point fit - try 2 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 56 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0249391 INFO: Points where local peeks in curvature occur are 107 91 67 (curv = 0.0410954) 116 116 43 (curv = 0.049922) INFO: Intermediate dominant points are 107 80 75 107 91 67 116 116 43 117 131 33 INFO: Final dominant points are 107 80 75 107 91 67 116 116 43 117 131 33 WARN: Defaulting to equidistant control points INFO: Selected control points are 107 80 75 109 97 61 116 114 44 117 131 33 INFO: Distances between consecutive points are 22 25 20 INFO: Selected control points in test subject's space are 142 88 29 144 106 25 150 123 19 150 140 16 INFO: Distances between consecutive points in test subject's space are 19 19 17 WARN: Could not find satisfactory control point fit - try 3 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 65 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0434333 INFO: Points where local peeks in curvature occur are 105 86 73 (curv = 0.0715313) 120 117 37 (curv = 0.145477) INFO: Intermediate dominant points are 105 75 88 105 86 73 120 117 37 117 131 36 INFO: Final dominant points are 105 75 88 105 86 73 120 117 37 117 131 36 WARN: Defaulting to equidistant control points INFO: Selected control points are 105 75 88 110 95 64 118 109 43 117 131 36 INFO: Distances between consecutive points are 32 26 23 INFO: Selected control points in test subject's space are 141 82 34 145 103 26 151 119 18 150 140 17 INFO: Distances between consecutive points in test subject's space are 23 19 21 WARN: Could not find satisfactory control point fit - try 4 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 58 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0275492 INFO: Points where local peeks in curvature occur are 107 91 67 (curv = 0.0408923) 109 98 61 (curv = 0.0283712) 113 109 47 (curv = 0.0376695) 116 118 42 (curv = 0.0559133) INFO: Intermediate dominant points are 107 80 75 107 91 67 116 118 42 117 130 33 INFO: Final dominant points are 107 80 75 107 91 67 116 118 42 117 130 33 WARN: Defaulting to equidistant control points INFO: Selected control points are 107 80 75 109 98 61 115 114 44 117 130 33 INFO: Distances between consecutive points are 23 24 20 INFO: Selected control points in test subject's space are 142 88 29 144 107 25 149 123 19 150 139 16 INFO: Distances between consecutive points in test subject's space are 20 18 16 WARN: Could not find satisfactory control point fit - try 5 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 57 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.02502 INFO: Points where local peeks in curvature occur are 108 90 67 (curv = 0.0360269) 114 110 47 (curv = 0.0408157) 116 118 42 (curv = 0.0600972) INFO: Intermediate dominant points are 108 80 75 111 99 60 116 118 42 117 130 33 INFO: Final dominant points are 108 80 75 113 109 49 116 118 42 117 130 33 WARN: Defaulting to equidistant control points INFO: Selected control points are 108 80 75 110 98 61 114 113 45 117 130 33 INFO: Distances between consecutive points are 23 22 21 INFO: Selected control points in test subject's space are 143 88 29 145 107 25 148 122 19 150 139 16 INFO: Distances between consecutive points in test subject's space are 20 16 17 WARN: Could not find satisfactory control point fit - try 6 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 52 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 9 INFO: Minimum allowable curvature at a dominant point is 0.0241599 INFO: Points where local peeks in curvature occur are 112 100 56 (curv = 0.0282194) 112 106 51 (curv = 0.0284236) 115 115 44 (curv = 0.0461041) 114 120 41 (curv = 0.0308676) INFO: Intermediate dominant points are 110 79 74 111 96 60 115 115 44 116 131 37 INFO: Final dominant points are 110 79 74 112 106 51 115 115 44 116 131 37 INFO: Selected control points are 110 79 74 111 105 51 111 111 43 116 131 37 INFO: Distances between consecutive points are 35 10 21 INFO: Selected control points in test subject's space are 145 88 29 145 114 21 145 121 18 149 140 17 INFO: Distances between consecutive points in test subject's space are 27 8 19 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.cab_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.cab_PP_avg33_mni_bbr_cpts_4.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_4.nii.gz Done in 6.961 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.cab_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.cab_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.cab_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.cab_PP.bbr.trk INFO: Rejected 25 streamlines for straying off mask INFO: Rejected 65 streamlines for reversing direction INFO: Rejected 18 streamlines as length outliers INFO: Have 4128 total streamlines (min/mean/max length: 13/44/91) Processing pathway 14 of 18... Matching streamline ends INFO: Have 1240 non-truncated streamlines (min/mean/max length: 26/54/93) INFO: Center of mass of start points: (71+/-5, 80+/-7, 78+/-8) INFO: Center of mass of midpoints: (67+/-2, 101+/-2, 56+/-3) INFO: Center of mass of end points: (63+/-4, 126+/-7, 38+/-4) INFO: Split streamlines into 13 segments Computing path histograms INFO: Total streamline volume is 17266 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 62 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.025625 INFO: Points where local peeks in curvature occur are 68 98 61 (curv = 0.035358) 66 110 44 (curv = 0.0492048) INFO: Intermediate dominant points are 74 76 83 68 98 61 66 110 44 66 130 38 INFO: Final dominant points are 74 76 83 68 98 61 66 110 44 66 130 38 WARN: Defaulting to equidistant control points INFO: Selected control points are 74 76 83 69 93 66 66 108 45 66 130 38 INFO: Distances between consecutive points are 25 26 23 INFO: Selected control points in test subject's space are 114 83 32 109 101 27 106 117 19 106 138 18 INFO: Distances between consecutive points in test subject's space are 19 18 21 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 62 voxels Selecting 4 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.026277 INFO: Points where local peeks in curvature occur are 65 108 46 (curv = 0.0700887) INFO: Intermediate dominant points are 74 76 83 68 96 63 65 108 46 66 131 38 INFO: Final dominant points are 74 76 83 67 100 57 65 108 46 66 131 38 INFO: Selected control points are 74 76 83 66 99 57 64 104 44 66 131 38 INFO: Distances between consecutive points are 36 14 28 INFO: Selected control points in test subject's space are 114 83 32 106 107 23 104 113 19 106 139 18 INFO: Distances between consecutive points in test subject's space are 27 7 26 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.cab_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.cab_PP_avg33_mni_bbr_cpts_4.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_4.nii.gz Done in 5.875 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.slfp_PP.bbr.trk INFO: Rejected 483 streamlines for straying off mask INFO: Rejected 684 streamlines for reversing direction INFO: Rejected 41 streamlines as length outliers INFO: Have 9059 total streamlines (min/mean/max length: 20/59/99) Processing pathway 15 of 18... Matching streamline ends INFO: Have 3752 non-truncated streamlines (min/mean/max length: 26/65/100) INFO: Center of mass of start points: (145+/-6, 127+/-5, 98+/-11) INFO: Center of mass of midpoints: (128+/-4, 106+/-4, 102+/-4) INFO: Center of mass of end points: (141+/-10, 84+/-10, 111+/-12) INFO: Split streamlines into 14 segments Computing path histograms INFO: Total streamline volume is 49353 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 72 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 9 INFO: Minimum allowable curvature at a dominant point is 0.05886 INFO: Points where local peeks in curvature occur are 129 115 99 (curv = 0.0903529) 130 86 103 (curv = 0.141374) INFO: Intermediate dominant points are 150 131 97 129 115 99 129 102 102 130 86 103 150 86 113 INFO: Final dominant points are 150 131 97 129 115 99 128 95 103 130 86 103 150 86 113 INFO: Selected control points are 150 131 97 129 115 98 129 96 103 130 86 104 150 86 113 INFO: Distances between consecutive points are 26 20 10 22 INFO: Selected control points in test subject's space are 180 132 42 162 117 41 162 99 42 163 90 41 181 89 45 INFO: Distances between consecutive points in test subject's space are 23 18 9 18 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 28.855 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.slfp_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.slfp_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.slfp_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.slfp_PP.bbr.trk INFO: Rejected 785 streamlines for straying off mask INFO: Rejected 406 streamlines for reversing direction INFO: Rejected 80 streamlines as length outliers INFO: Have 14351 total streamlines (min/mean/max length: 18/64/99) Processing pathway 16 of 18... Matching streamline ends INFO: Have 6441 non-truncated streamlines (min/mean/max length: 27/69/103) INFO: Center of mass of start points: (34+/-8, 131+/-6, 98+/-12) INFO: Center of mass of midpoints: (52+/-4, 109+/-3, 103+/-3) INFO: Center of mass of end points: (39+/-9, 81+/-10, 113+/-11) INFO: Split streamlines into 15 segments Computing path histograms INFO: Total streamline volume is 64198 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 3 voxels INFO: Length of center streamline is 76 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0605977 INFO: Points where local peeks in curvature occur are 40 123 95 (curv = 0.0756807) 51 118 101 (curv = 0.0874053) 54 111 103 (curv = 0.077998) 53 97 106 (curv = 0.0608137) 52 79 102 (curv = 0.133891) INFO: Intermediate dominant points are 31 131 96 51 118 101 53 97 106 52 79 102 42 73 114 INFO: Final dominant points are 31 131 96 51 118 101 53 97 106 52 79 102 42 73 114 INFO: Selected control points are 31 131 96 51 117 100 54 98 106 52 79 102 42 73 114 INFO: Distances between consecutive points are 25 20 20 17 INFO: Selected control points in test subject's space are 76 130 42 93 117 43 96 99 44 95 83 40 86 76 45 INFO: Distances between consecutive points in test subject's space are 21 18 17 12 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 80.716 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/lh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/lh.slft_PP.bbr.trk INFO: Rejected 409 streamlines for straying off mask INFO: Rejected 67 streamlines for reversing direction INFO: Rejected 33 streamlines as length outliers INFO: Have 7385 total streamlines (min/mean/max length: 34/89/136) Processing pathway 17 of 18... Matching streamline ends INFO: Have 4817 non-truncated streamlines (min/mean/max length: 40/92/136) INFO: Center of mass of start points: (144+/-7, 132+/-6, 94+/-10) INFO: Center of mass of midpoints: (126+/-2, 96+/-4, 101+/-3) INFO: Center of mass of end points: (147+/-7, 84+/-13, 65+/-9) INFO: Split streamlines into 23 segments Computing path histograms INFO: Total streamline volume is 45730 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 90 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0467628 INFO: Points where local peeks in curvature occur are 128 118 98 (curv = 0.070723) 121 92 101 (curv = 0.138214) 129 80 84 (curv = 0.0639372) INFO: Intermediate dominant points are 147 137 93 128 118 98 121 92 101 129 80 84 143 94 57 INFO: Final dominant points are 147 137 93 128 118 98 121 92 101 129 80 84 143 94 57 INFO: Selected control points are 147 137 93 128 117 97 122 92 100 129 79 84 143 94 57 INFO: Distances between consecutive points are 28 26 22 34 INFO: Selected control points in test subject's space are 177 138 41 161 119 41 156 96 40 162 87 32 174 104 23 INFO: Distances between consecutive points in test subject's space are 25 24 13 23 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.slft_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/lh.slft_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 28.435 sec. Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc001/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc002/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc003/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc004/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc005/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc006/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc007/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc008/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc009/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc010/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc011/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc012/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc013/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc014/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc015/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc016/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc017/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc018/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc019/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc020/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc021/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc022/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc023/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc024/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc025/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc026/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc027/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc028/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc029/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc030/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc031/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc032/dlabel/mni/rh.slft_PP.bbr.trk Loading streamline start ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.slft_PP_roi1.bbr.nii.gz Loading streamline end ROI from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.slft_PP_roi2.bbr.nii.gz Loading streamlines from /usr/local/freesurfer/trctrain/trc033/dlabel/mni/rh.slft_PP.bbr.trk INFO: Rejected 89 streamlines for straying off mask INFO: Rejected 16 streamlines for reversing direction INFO: Rejected 26 streamlines as length outliers INFO: Have 3011 total streamlines (min/mean/max length: 46/90/141) Processing pathway 18 of 18... Matching streamline ends INFO: Have 1618 non-truncated streamlines (min/mean/max length: 55/92/143) INFO: Center of mass of start points: (40+/-9, 135+/-8, 96+/-14) INFO: Center of mass of midpoints: (56+/-2, 96+/-3, 103+/-3) INFO: Center of mass of end points: (31+/-6, 81+/-9, 71+/-8) INFO: Split streamlines into 24 segments Computing path histograms INFO: Total streamline volume is 31670 voxels Computing prior on underlying anatomy (non-truncated streamlines only) Computing prior on curvature (non-truncated streamlines only) Computing prior on underlying anatomy (all streamlines) Computing prior on curvature (all streamlines) Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0544081 INFO: Points where local peeks in curvature occur are 56 126 95 (curv = 0.115336) 58 99 102 (curv = 0.108833) 52 87 98 (curv = 0.0917009) 51 82 87 (curv = 0.0588861) INFO: Intermediate dominant points are 42 138 83 56 126 95 58 99 102 52 87 98 29 83 70 INFO: Final dominant points are 42 138 83 56 126 95 58 99 102 52 87 98 29 83 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 42 138 83 54 121 98 57 97 102 50 81 86 29 83 70 INFO: Distances between consecutive points are 26 25 24 26 INFO: Selected control points in test subject's space are 85 138 37 96 121 42 99 99 42 93 87 34 74 90 28 INFO: Distances between consecutive points in test subject's space are 21 22 16 20 WARN: Could not find satisfactory control point fit - try 1 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 105 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 13 INFO: Minimum allowable curvature at a dominant point is 0.055713 INFO: Points where local peeks in curvature occur are 58 131 94 (curv = 0.173692) 54 120 98 (curv = 0.0947735) 56 110 101 (curv = 0.0589635) 55 99 104 (curv = 0.0909489) 53 81 92 (curv = 0.0749849) INFO: Intermediate dominant points are 32 142 85 58 131 94 55 99 104 51 80 88 32 89 69 INFO: Final dominant points are 32 142 85 58 131 94 55 99 104 45 81 75 32 89 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 32 142 85 58 129 95 55 104 103 51 80 88 32 89 69 INFO: Distances between consecutive points are 31 26 29 28 INFO: Selected control points in test subject's space are 77 142 39 99 129 41 97 105 43 94 86 35 77 96 28 INFO: Distances between consecutive points in test subject's space are 26 24 21 21 WARN: Could not find satisfactory control point fit - try 2 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 110 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 14 INFO: Minimum allowable curvature at a dominant point is 0.045208 INFO: Points where local peeks in curvature occur are 53 130 92 (curv = 0.0955001) 52 119 97 (curv = 0.0509654) 54 105 102 (curv = 0.0588573) 52 79 91 (curv = 0.099188) 48 78 80 (curv = 0.0708915) INFO: Intermediate dominant points are 31 142 82 53 130 92 54 105 102 52 79 91 26 77 70 INFO: Final dominant points are 31 142 82 53 130 92 54 105 102 52 79 91 26 77 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 142 82 53 126 93 54 98 101 50 78 83 26 77 70 INFO: Distances between consecutive points are 29 29 27 27 INFO: Selected control points in test subject's space are 76 142 37 95 127 40 96 100 41 93 84 33 71 85 27 INFO: Distances between consecutive points in test subject's space are 24 27 18 23 WARN: Could not find satisfactory control point fit - try 3 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0507033 INFO: Points where local peeks in curvature occur are 53 120 99 (curv = 0.131558) 55 97 103 (curv = 0.0765911) 53 83 93 (curv = 0.0600204) 50 80 86 (curv = 0.0589787) 39 86 71 (curv = 0.0858641) INFO: Intermediate dominant points are 32 128 93 53 120 99 55 97 103 53 83 93 28 90 70 INFO: Final dominant points are 32 128 93 53 120 99 55 97 103 53 83 93 28 90 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 32 128 93 53 117 100 55 94 102 47 80 80 28 90 70 INFO: Distances between consecutive points are 25 23 27 24 INFO: Selected control points in test subject's space are 77 128 41 95 117 43 97 96 42 90 87 32 73 97 28 INFO: Distances between consecutive points in test subject's space are 21 21 15 20 WARN: Could not find satisfactory control point fit - try 4 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 95 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0521069 INFO: Points where local peeks in curvature occur are 53 125 99 (curv = 0.0730434) 57 115 101 (curv = 0.077661) 58 104 107 (curv = 0.14553) 47 82 92 (curv = 0.0923791) 45 82 82 (curv = 0.056162) INFO: Intermediate dominant points are 34 142 102 53 125 99 58 104 107 47 82 92 27 77 70 INFO: Final dominant points are 34 142 102 53 125 99 58 104 107 47 82 92 27 77 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 142 102 55 122 100 57 99 105 46 82 86 27 77 70 INFO: Distances between consecutive points are 29 24 28 25 INFO: Selected control points in test subject's space are 79 139 45 97 122 43 99 101 43 89 88 34 72 85 27 INFO: Distances between consecutive points in test subject's space are 25 21 19 19 WARN: Could not find satisfactory control point fit - try 5 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 96 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0519818 INFO: Points where local peeks in curvature occur are 52 126 99 (curv = 0.0651336) 57 115 102 (curv = 0.082237) 58 104 107 (curv = 0.128711) 48 82 93 (curv = 0.100992) INFO: Intermediate dominant points are 34 142 103 52 126 99 58 104 107 48 82 93 27 77 70 INFO: Final dominant points are 34 142 103 52 126 99 58 104 107 48 82 93 27 77 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 142 103 55 122 100 57 99 105 46 82 88 27 77 70 INFO: Distances between consecutive points are 29 24 26 27 INFO: Selected control points in test subject's space are 79 139 46 97 122 43 99 101 43 89 87 35 72 85 27 INFO: Distances between consecutive points in test subject's space are 25 21 19 19 WARN: Could not find satisfactory control point fit - try 6 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 90 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0498729 INFO: Points where local peeks in curvature occur are 53 119 100 (curv = 0.0848449) 54 100 104 (curv = 0.0786155) 53 82 92 (curv = 0.0664417) 47 80 79 (curv = 0.058139) INFO: Intermediate dominant points are 33 129 95 53 119 100 54 100 104 53 82 92 27 90 71 INFO: Final dominant points are 33 129 95 53 119 100 54 100 104 53 82 92 27 90 71 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 129 95 53 116 100 55 94 102 48 80 82 27 90 71 INFO: Distances between consecutive points are 24 22 25 26 INFO: Selected control points in test subject's space are 78 129 42 95 117 42 97 96 42 91 86 32 72 96 29 INFO: Distances between consecutive points in test subject's space are 21 21 15 22 WARN: Could not find satisfactory control point fit - try 7 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 94 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0522413 INFO: Points where local peeks in curvature occur are 53 125 101 (curv = 0.0739886) 57 114 103 (curv = 0.0651575) 58 104 107 (curv = 0.132885) 47 82 92 (curv = 0.0806077) INFO: Intermediate dominant points are 34 139 103 53 125 101 58 104 107 47 82 92 27 77 70 INFO: Final dominant points are 34 139 103 53 125 101 58 104 107 47 82 92 27 77 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 139 103 56 118 102 56 96 103 46 82 84 27 77 70 INFO: Distances between consecutive points are 30 22 26 24 INFO: Selected control points in test subject's space are 79 137 46 98 118 43 98 98 42 89 88 33 72 85 27 INFO: Distances between consecutive points in test subject's space are 27 20 16 18 WARN: Could not find satisfactory control point fit - try 8 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 91 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.050069 INFO: Points where local peeks in curvature occur are 52 121 99 (curv = 0.130207) 54 98 103 (curv = 0.0745749) 53 83 93 (curv = 0.0644416) 46 81 77 (curv = 0.0586908) 42 84 72 (curv = 0.0606397) INFO: Intermediate dominant points are 31 128 93 52 121 99 54 98 103 53 83 93 28 90 70 INFO: Final dominant points are 31 128 93 52 121 99 54 98 103 53 83 93 28 90 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 128 93 53 118 99 54 96 103 49 80 84 28 90 70 INFO: Distances between consecutive points are 25 22 25 27 INFO: Selected control points in test subject's space are 76 128 41 95 118 42 96 98 42 92 86 33 73 97 28 INFO: Distances between consecutive points in test subject's space are 21 20 16 23 WARN: Could not find satisfactory control point fit - try 9 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 91 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0455956 INFO: Points where local peeks in curvature occur are 53 125 100 (curv = 0.0826439) 56 102 104 (curv = 0.0610214) 48 85 95 (curv = 0.0912904) INFO: Intermediate dominant points are 34 140 103 53 125 100 56 102 104 48 85 95 28 79 69 INFO: Final dominant points are 34 140 103 53 125 100 56 102 104 48 85 95 28 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 140 103 54 122 101 55 98 103 46 83 86 28 79 69 INFO: Distances between consecutive points are 27 24 24 25 INFO: Selected control points in test subject's space are 79 137 46 96 122 43 97 100 42 89 88 34 73 87 27 INFO: Distances between consecutive points in test subject's space are 23 22 16 17 WARN: Could not find satisfactory control point fit - try 10 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0457958 INFO: Points where local peeks in curvature occur are 52 124 100 (curv = 0.0723937) 56 109 104 (curv = 0.0844633) 48 85 95 (curv = 0.099143) INFO: Intermediate dominant points are 33 140 103 52 124 100 56 109 104 48 85 95 28 79 69 INFO: Final dominant points are 33 140 103 52 124 100 56 109 104 48 85 95 28 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 140 103 54 121 101 55 98 103 46 83 85 28 79 69 INFO: Distances between consecutive points are 28 23 25 24 INFO: Selected control points in test subject's space are 78 137 46 96 121 43 97 100 42 89 89 34 73 87 27 INFO: Distances between consecutive points in test subject's space are 24 21 16 18 WARN: Could not find satisfactory control point fit - try 11 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 90 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0494735 INFO: Points where local peeks in curvature occur are 51 121 99 (curv = 0.117745) 54 96 103 (curv = 0.0688114) 53 82 93 (curv = 0.0766333) 49 80 85 (curv = 0.0605107) INFO: Intermediate dominant points are 31 128 93 51 121 99 54 96 103 53 82 93 28 90 71 INFO: Final dominant points are 31 128 93 51 121 99 54 96 103 53 82 93 28 90 71 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 128 93 53 118 100 54 95 103 48 80 83 28 90 71 INFO: Distances between consecutive points are 25 23 26 25 INFO: Selected control points in test subject's space are 76 128 41 95 118 43 96 97 42 91 86 33 73 96 29 INFO: Distances between consecutive points in test subject's space are 22 21 15 21 WARN: Could not find satisfactory control point fit - try 12 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0503332 INFO: Points where local peeks in curvature occur are 51 121 99 (curv = 0.0862622) 54 105 103 (curv = 0.0630755) 54 95 103 (curv = 0.0709973) 50 80 87 (curv = 0.0628879) 39 86 71 (curv = 0.0858641) INFO: Intermediate dominant points are 31 128 93 51 121 99 54 95 103 50 80 87 28 90 70 INFO: Final dominant points are 31 128 93 51 121 99 54 95 103 50 80 87 28 90 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 128 93 53 116 100 54 94 102 47 80 80 28 90 70 INFO: Distances between consecutive points are 26 22 27 24 INFO: Selected control points in test subject's space are 76 128 41 95 117 42 96 96 42 90 87 32 73 97 28 INFO: Distances between consecutive points in test subject's space are 22 21 15 20 WARN: Could not find satisfactory control point fit - try 13 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 91 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.046186 INFO: Points where local peeks in curvature occur are 55 121 101 (curv = 0.0615228) 56 107 104 (curv = 0.0578098) 56 99 103 (curv = 0.0574745) 48 85 94 (curv = 0.0949264) INFO: Intermediate dominant points are 34 141 103 55 121 101 56 107 104 48 85 94 28 79 69 INFO: Final dominant points are 34 141 103 55 121 101 56 107 104 48 85 94 28 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 141 103 55 121 101 55 97 102 46 83 85 28 79 69 INFO: Distances between consecutive points are 29 24 24 24 INFO: Selected control points in test subject's space are 79 138 46 97 121 43 97 99 42 89 89 34 73 87 27 INFO: Distances between consecutive points in test subject's space are 25 22 15 18 WARN: Could not find satisfactory control point fit - try 14 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 89 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0462433 INFO: Points where local peeks in curvature occur are 52 124 101 (curv = 0.0544212) 56 116 102 (curv = 0.0529512) 56 108 104 (curv = 0.0510991) 55 100 103 (curv = 0.0580403) 48 84 93 (curv = 0.113251) 43 83 77 (curv = 0.051309) INFO: Intermediate dominant points are 33 140 103 52 124 101 55 100 103 48 84 93 28 79 69 INFO: Final dominant points are 33 140 103 52 124 101 55 100 103 48 84 93 28 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 140 103 55 119 101 54 96 102 46 83 83 28 79 69 INFO: Distances between consecutive points are 30 23 24 23 INFO: Selected control points in test subject's space are 78 137 46 97 119 43 96 98 42 89 89 33 73 87 27 INFO: Distances between consecutive points in test subject's space are 26 21 15 17 WARN: Could not find satisfactory control point fit - try 15 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 87 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0525215 INFO: Points where local peeks in curvature occur are 50 121 99 (curv = 0.0879324) 54 99 104 (curv = 0.0865024) 53 82 92 (curv = 0.0741171) 46 81 77 (curv = 0.0586908) 42 84 72 (curv = 0.0606397) INFO: Intermediate dominant points are 35 128 94 50 121 99 54 99 104 53 82 92 28 90 70 INFO: Final dominant points are 35 128 94 50 121 99 54 99 104 53 82 92 28 90 70 WARN: Defaulting to equidistant control points INFO: Selected control points are 35 128 94 53 115 100 54 94 102 48 80 83 28 90 70 INFO: Distances between consecutive points are 23 21 24 26 INFO: Selected control points in test subject's space are 79 128 41 95 116 42 96 96 42 91 86 33 73 97 28 INFO: Distances between consecutive points in test subject's space are 20 20 14 22 WARN: Could not find satisfactory control point fit - try 16 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 89 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0456406 INFO: Points where local peeks in curvature occur are 53 124 101 (curv = 0.0749588) 56 106 104 (curv = 0.0689621) 48 85 95 (curv = 0.0952838) INFO: Intermediate dominant points are 34 140 103 53 124 101 56 106 104 48 85 95 29 79 69 INFO: Final dominant points are 34 140 103 53 124 101 56 106 104 48 85 95 29 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 140 103 54 120 101 55 98 103 46 83 85 29 79 69 INFO: Distances between consecutive points are 28 22 25 24 INFO: Selected control points in test subject's space are 79 137 46 96 120 43 97 100 42 89 89 34 74 87 27 INFO: Distances between consecutive points in test subject's space are 24 20 16 17 WARN: Could not find satisfactory control point fit - try 17 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.047638 INFO: Points where local peeks in curvature occur are 53 123 100 (curv = 0.0591739) 56 105 104 (curv = 0.0788528) 47 84 92 (curv = 0.105179) INFO: Intermediate dominant points are 33 141 103 53 123 100 56 105 104 47 84 92 28 79 69 INFO: Final dominant points are 33 141 103 53 123 100 56 105 104 47 84 92 28 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 141 103 54 121 101 55 98 102 46 84 84 28 79 69 INFO: Distances between consecutive points are 29 23 25 24 INFO: Selected control points in test subject's space are 78 138 46 96 121 43 97 100 42 89 90 33 73 87 27 INFO: Distances between consecutive points in test subject's space are 25 21 16 17 WARN: Could not find satisfactory control point fit - try 18 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 93 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 12 INFO: Minimum allowable curvature at a dominant point is 0.0470386 INFO: Points where local peeks in curvature occur are 53 123 100 (curv = 0.0594624) 56 104 104 (curv = 0.080534) 55 97 102 (curv = 0.0486378) 48 86 95 (curv = 0.104467) INFO: Intermediate dominant points are 33 141 103 56 104 104 48 86 95 45 84 83 27 79 69 INFO: Final dominant points are 33 141 103 56 104 104 48 86 95 39 84 72 27 79 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 141 103 54 121 100 54 96 102 45 84 83 27 79 69 INFO: Distances between consecutive points are 29 25 24 23 INFO: Selected control points in test subject's space are 78 138 46 96 121 43 96 98 42 88 90 33 72 87 27 INFO: Distances between consecutive points in test subject's space are 25 23 14 17 WARN: Could not find satisfactory control point fit - try 19 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 86 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0569891 INFO: Points where local peeks in curvature occur are 51 118 101 (curv = 0.0825601) 52 115 102 (curv = 0.0819523) 56 95 104 (curv = 0.0771318) 55 89 102 (curv = 0.0667286) 53 82 95 (curv = 0.0895094) INFO: Intermediate dominant points are 33 129 101 51 118 101 53 82 95 50 82 84 34 77 77 INFO: Final dominant points are 33 129 101 51 118 101 53 82 95 43 83 73 34 77 77 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 129 101 53 114 102 56 92 103 50 82 85 34 77 77 INFO: Distances between consecutive points are 25 22 21 19 INFO: Selected control points in test subject's space are 78 128 44 95 114 43 98 94 42 93 88 34 78 84 30 INFO: Distances between consecutive points in test subject's space are 22 20 11 16 WARN: Could not find satisfactory control point fit - try 20 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 87 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0440453 INFO: Points where local peeks in curvature occur are 54 123 101 (curv = 0.0799356) 57 107 105 (curv = 0.057148) 48 84 95 (curv = 0.0966677) INFO: Intermediate dominant points are 34 139 104 54 123 101 57 107 105 48 84 95 33 81 69 INFO: Final dominant points are 34 139 104 54 123 101 57 107 105 48 84 95 33 81 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 139 104 55 122 101 56 100 104 47 83 91 33 81 69 INFO: Distances between consecutive points are 27 22 23 26 INFO: Selected control points in test subject's space are 79 136 46 97 122 43 98 102 43 90 88 36 77 89 27 INFO: Distances between consecutive points in test subject's space are 23 20 18 16 WARN: Could not find satisfactory control point fit - try 21 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 89 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0458844 INFO: Points where local peeks in curvature occur are 54 123 101 (curv = 0.0979336) 56 107 105 (curv = 0.0822709) 55 98 103 (curv = 0.0477574) 48 84 94 (curv = 0.0955295) INFO: Intermediate dominant points are 33 140 105 54 123 101 56 100 104 48 84 94 33 81 69 INFO: Final dominant points are 33 140 105 54 123 101 54 94 101 48 84 94 33 81 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 140 105 54 123 101 56 100 104 46 83 88 33 81 69 INFO: Distances between consecutive points are 27 23 25 23 INFO: Selected control points in test subject's space are 78 137 47 96 123 43 98 102 43 89 88 35 77 89 27 INFO: Distances between consecutive points in test subject's space are 23 21 18 14 WARN: Could not find satisfactory control point fit - try 22 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 81 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 10 INFO: Minimum allowable curvature at a dominant point is 0.0522708 INFO: Points where local peeks in curvature occur are 52 118 100 (curv = 0.0976288) 53 100 104 (curv = 0.0762681) 54 97 103 (curv = 0.0775172) 53 83 93 (curv = 0.068704) 50 80 86 (curv = 0.0639931) INFO: Intermediate dominant points are 35 128 94 52 118 100 54 97 103 53 83 93 32 90 69 INFO: Final dominant points are 35 128 94 52 118 100 54 97 103 53 83 93 32 90 69 WARN: Defaulting to equidistant control points INFO: Selected control points are 35 128 94 53 115 100 54 95 103 49 80 84 32 90 69 INFO: Distances between consecutive points are 23 20 25 25 INFO: Selected control points in test subject's space are 79 128 41 95 116 42 96 97 42 92 86 33 77 97 28 INFO: Distances between consecutive points in test subject's space are 20 19 15 19 WARN: Could not find satisfactory control point fit - try 23 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 86 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0543583 INFO: Points where local peeks in curvature occur are 53 115 102 (curv = 0.101316) 53 106 104 (curv = 0.0612415) 56 96 104 (curv = 0.0706371) 56 91 103 (curv = 0.060168) 54 85 101 (curv = 0.0837136) 53 80 91 (curv = 0.0613242) INFO: Intermediate dominant points are 33 129 101 53 115 102 54 85 101 52 80 83 33 75 75 INFO: Final dominant points are 33 129 101 53 115 102 54 85 101 44 82 73 33 75 75 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 129 101 53 114 102 56 92 103 52 80 84 33 75 75 INFO: Distances between consecutive points are 25 22 23 22 INFO: Selected control points in test subject's space are 78 128 44 95 114 43 98 94 42 94 86 33 78 82 29 INFO: Distances between consecutive points in test subject's space are 22 20 13 17 WARN: Could not find satisfactory control point fit - try 24 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 89 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0523631 INFO: Points where local peeks in curvature occur are 52 117 101 (curv = 0.112716) 57 95 104 (curv = 0.0676929) 55 87 102 (curv = 0.0762004) 53 81 94 (curv = 0.0786657) 52 80 85 (curv = 0.0559462) INFO: Intermediate dominant points are 31 131 99 52 117 101 57 95 104 53 81 94 34 78 74 INFO: Final dominant points are 31 131 99 52 117 101 57 95 104 53 81 94 34 78 74 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 131 99 53 116 102 57 92 103 52 80 85 34 78 74 INFO: Distances between consecutive points are 27 24 22 21 INFO: Selected control points in test subject's space are 76 130 43 95 116 43 99 94 42 94 86 34 78 85 29 INFO: Distances between consecutive points in test subject's space are 24 22 12 17 WARN: Could not find satisfactory control point fit - try 25 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 89 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0509719 INFO: Points where local peeks in curvature occur are 52 117 101 (curv = 0.106241) 56 90 103 (curv = 0.0762605) 53 80 91 (curv = 0.051943) 53 80 85 (curv = 0.0567582) 49 80 78 (curv = 0.0531748) INFO: Intermediate dominant points are 33 129 101 52 117 101 56 90 103 49 80 78 33 76 75 INFO: Final dominant points are 33 129 101 52 117 101 56 90 103 49 80 78 33 76 75 WARN: Defaulting to equidistant control points INFO: Selected control points are 33 129 101 54 114 102 57 91 103 52 80 84 33 76 75 INFO: Distances between consecutive points are 26 23 23 21 INFO: Selected control points in test subject's space are 78 128 44 96 114 43 99 94 42 94 86 33 78 83 29 INFO: Distances between consecutive points in test subject's space are 23 20 13 17 WARN: Could not find satisfactory control point fit - try 26 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 85 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0543301 INFO: Points where local peeks in curvature occur are 51 117 101 (curv = 0.0925797) 56 96 104 (curv = 0.0835785) 55 88 102 (curv = 0.0685132) 52 82 95 (curv = 0.0938857) INFO: Intermediate dominant points are 34 128 101 51 117 101 56 96 104 52 82 95 34 78 75 INFO: Final dominant points are 34 128 101 51 117 101 56 96 104 52 82 95 34 78 75 WARN: Defaulting to equidistant control points INFO: Selected control points are 34 128 101 52 115 102 56 93 103 50 82 85 34 78 75 INFO: Distances between consecutive points are 22 22 22 19 INFO: Selected control points in test subject's space are 79 127 44 94 115 43 98 95 42 93 88 34 78 85 29 INFO: Distances between consecutive points in test subject's space are 19 20 12 16 WARN: Could not find satisfactory control point fit - try 27 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 87 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0508087 INFO: Points where local peeks in curvature occur are 53 115 102 (curv = 0.0873428) 57 95 104 (curv = 0.0760012) 55 85 101 (curv = 0.103893) 53 80 91 (curv = 0.0543973) 52 80 85 (curv = 0.0536442) INFO: Intermediate dominant points are 31 128 99 53 115 102 55 85 101 52 80 85 34 78 74 INFO: Final dominant points are 31 128 99 53 115 102 55 85 101 52 80 85 34 78 74 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 128 99 52 116 101 57 94 104 53 80 87 34 78 74 INFO: Distances between consecutive points are 24 23 22 23 INFO: Selected control points in test subject's space are 76 127 43 94 116 43 99 96 42 95 86 34 78 85 29 INFO: Distances between consecutive points in test subject's space are 21 21 13 18 WARN: Could not find satisfactory control point fit - try 28 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 87 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0511504 INFO: Points where local peeks in curvature occur are 53 115 102 (curv = 0.0883091) 57 95 104 (curv = 0.0762743) 55 85 101 (curv = 0.077328) 52 80 83 (curv = 0.0726445) INFO: Intermediate dominant points are 31 128 99 53 115 102 55 85 101 52 80 83 34 78 74 INFO: Final dominant points are 31 128 99 53 115 102 55 85 101 52 80 83 34 78 74 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 128 99 52 116 101 57 94 104 52 80 86 34 78 74 INFO: Distances between consecutive points are 24 23 23 22 INFO: Selected control points in test subject's space are 76 127 43 94 116 43 99 96 42 94 86 34 78 85 29 INFO: Distances between consecutive points in test subject's space are 21 21 14 17 WARN: Could not find satisfactory control point fit - try 29 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 85 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0549461 INFO: Points where local peeks in curvature occur are 51 117 101 (curv = 0.0920428) 56 96 104 (curv = 0.0917926) 55 88 102 (curv = 0.0673347) 53 82 96 (curv = 0.097922) 49 82 82 (curv = 0.0611467) INFO: Intermediate dominant points are 31 129 99 51 117 101 56 96 104 53 82 96 34 78 76 INFO: Final dominant points are 31 129 99 51 117 101 56 96 104 53 82 96 34 78 76 WARN: Defaulting to equidistant control points INFO: Selected control points are 31 129 99 52 115 101 56 93 103 50 82 85 34 78 76 INFO: Distances between consecutive points are 25 22 22 19 INFO: Selected control points in test subject's space are 76 128 43 94 115 43 98 95 42 93 88 34 78 85 30 INFO: Distances between consecutive points in test subject's space are 22 20 12 16 WARN: Could not find satisfactory control point fit - try 30 Finding center streamline INFO: Step is 5 voxels INFO: Length of center streamline is 84 voxels Selecting 5 points on center streamline INFO: Minimum allowable distance between dominant points is 11 INFO: Minimum allowable curvature at a dominant point is 0.0522221 INFO: Points where local peeks in curvature occur are 51 118 101 (curv = 0.08957) 53 106 104 (curv = 0.0533716) 56 95 104 (curv = 0.0627361) 56 91 103 (curv = 0.0658541) 54 82 96 (curv = 0.0734739) 49 81 79 (curv = 0.054201) INFO: Intermediate dominant points are 33 129 101 51 118 101 54 82 96 49 81 79 34 78 74 INFO: Final dominant points are 33 129 101 51 118 101 54 82 96 49 81 79 34 78 74 INFO: Selected control points are 33 129 101 51 117 102 55 83 99 49 82 77 34 78 74 INFO: Distances between consecutive points are 22 34 23 16 INFO: Selected control points in test subject's space are 78 128 44 94 117 43 97 87 39 92 89 30 78 85 29 INFO: Distances between consecutive points in test subject's space are 19 30 10 15 Writing output files to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.slft_PP_avg33_mni_bbr_* Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/mni/rh.slft_PP_avg33_mni_bbr_cpts_5.nii.gz Writing spline volume to /media/freds/LinuxData2/FIS_ESTHERCUBO_RESO/Tractografia_FIS_CUBO/TractHipoResults/T1_GONZALEZ_DE_LAS_HERAS_TERESA_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_177643_NeuroNavegador_Sag_FSPGR_3D_geometry_activo_GD_20190403164820_3/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5.nii.gz Done in 10.016 sec. dmri_train done #------------------------------------- trac-preproc finished without error at jue ago 8 11:27:06 CEST 2019