Dear FS,

 

I figured out how to list my ctabe-file (attached). Again, the file myaparc was created but this time I got the following error:

 

Colortable:aparc.annot.ctab

Annotname: myaparc

Nhitsfile nhits.mgh

Nlabels 6

Labeltresh 0  0.00000

Loading freesurfer/fsaverage/surf/lh.orig

 

1   9345678 fusiform

2  145768794 inferiorparietal

3   79873658 inferiortemporal

(etc)

Mapping unhit to unknown

Found 137851 unhit vertices

Writing annot to freesurfer/fsaverage/lh.myaparc.annot

 

What goes wrong?

 

My command line is:

mris_label2annot --subject fsaverage --hemi  lh  --ctab aparc.annot.ctab --annot myaparc  --l lh.fusiform.label

  --l lh.inferiorparietal.label (etc.)  --nhits nhits.mgh

 

(I have version 5.3)

 

Thanks for your help,

 

Caroline

 

 

 

 

 

My command line is:

mris_label2annot --subject fsaverage --hemi  lh  --ctab aparc.annot.ctab --annot myaparc  --l lh.fusiform.label

  --l lh.inferiorparietal.label (etc.)  --nhits nhits.mgh

(I have version 5.3)

 

Regards, Caroline

 

Message: 3

Date: Wed, 3 Aug 2016 09:30:48 -0400

From: Douglas Greve <greve@nmr.mgh.harvard.edu>

Subject: Re: [Freesurfer] mapping error

To: freesurfer@nmr.mgh.harvard.edu

Message-ID: <f3f77469-16ad-6fdf-f647-80aee162dbfc@nmr.mgh.harvard.edu>

Content-Type: text/plain; charset="windows-1252"

 

what is your command line?

 

 

On 8/3/16 6:00 AM, Caroline Beelen wrote:

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