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Dear Tim,

Thanks for your response. I'm sure that the command is mri-convert (I was using it few months ago without problems). Btw, we are experiencing problems also with the recon-all command at different computers. I don't know which is the error, any more ideas?

Best,
Jennifer 

De: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> en nombre de Tim Schäfer <ts+ml@rcmd.org>
Enviado: jueves, 16 de mayo de 2019 11:50
Para: Freesurfer support list
Asunto: Re: [Freesurfer] mri_convert issues
 
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Dear Jennifer,

could it be that you are confusing `mri_convert` and `mris_convert` (note the 's')?

Best,

Tim

> On May 16, 2019 at 10:58 AM jennifer sorinas <jenny_8mzn@hotmail.com> wrote:
> I was trying to convert nifti1 files (.hdr and .img) to nii files using the command:
>     > mri_convert -i input.hdr -it nifti1 -ot nii -o output.nii.gz
> But this error pop-up:
> mri_convert.bin: unknown flag '-i input.hdr'
>
> The same command was working on my unit a few months ago. Does anybody know wha's going on?
>
> Thank you very much.
> Best,
> Jennifer
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--
Dr. Tim Schäfer
Postdoc Computational Neuroimaging
Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy
University Hospital Frankfurt, Goethe University Frankfurt am Main, Germany

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