From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Salar Dini, Elaheh <elaheh.salardini@yale.edu>
Sent: Wednesday, June 29, 2022 11:38 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] trac-all -prep -c ERROR

External Email - Use Caution

Dear experts,

I am running TRACULA for 90 subjects. Exceptionally, for one of the subjects, I get the following error in -prep step:

((INFO: Distances between consecutive points in test subject's space are 10 13 12 13 13 12

WARN: Could not find satisfactory control point fit - try 17034

Writing output files to /home2/am2359/fs6_data/TRACULA/subjects_dir/47/dlabel/syn/lh.cst_avg16_syn_bbr_*

Writing spline volume to /home2/am2359/fs6_data/TRACULA/subjects_dir/47/dlabel/syn/lh.cst_avg16_syn_bbr_cpts_7.nii.gz

Segmentation fault (core dumped)

Linux tauruspet.med.yale.edu 3.10.0-693.el7.x86_64 #1 SMP Tue Aug 22 21:09:27 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux

trac-preproc exited with ERRORS at Wed Jun 29 10:31:11 EDT 2022))

I am attaching the log file as well: MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://drive.google.com/file/d/1pgEmkMtk4UoELpGR2bU_Vac-2BDr-eNy/view?usp=sharing

On a quick look, aparc+aseg seems to be properly done. Will you please help me to troubleshoot this if possible?

Thank you,

Ela