External Email - Use Caution        

You could also try directly sourcing the FS-711 like this:

if using bash: source /usr/local/freesurfer/nmr-stable711-env-bash
if using csh: source /usr/local/freesurfer/nmr-stable711-env
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Huang, Yujing <YHUANG43@mgh.harvard.edu>
Sent: Tuesday, May 2, 2023 11:24 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Error Sourcing Freesurfer
 

        External Email - Use Caution        

Hi Isabella,

 

‘fs-stable711-env-autoselect’ should be the string passed to fsenv script.

 

For example, to source 7.2.0 release:

If you are using csh:  source /cluster/freesurfer/fsenv.csh 7.2.0

If you are using bash: source /cluster/freesurfer/fsenv.sh  7.2.0

 

Best,

 

Yujing

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Turco, Isabella
Sent: Tuesday, May 2, 2023 10:55 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Error Sourcing Freesurfer

 

        External Email - Use Caution        

Hello,

 

When trying to source Freesurfer version 7.1.1 using the command below, I’m getting the error “No such file or directory.”

source /usr/local/freesurfer/fs-stable711-env-autoselect

Any guidance on potential solutions would be much appreciated!

 

Thanks,

Isabella

 

Isabella Turco, B.S.

Senior Clinical Research Coordinator

Massachusetts General Hospital

Department of Anesthesia, Critical Care and Pain Medicine

617-643-2896

iturco@mgh.harvard.edu