Hi Rachel,

Are you trying to run tkregister2?  Looks like you forgot the t at the start of the command.

-Paul
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Rachel Wagner <rwagne2@uwo.ca>
Sent: Tuesday, June 28, 2022 4:29 PM
To: freesurfer@nmr.mgh.harvard.edu <Freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Command Not Found
 

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Hello,

 

Thank you for your help! I am trying to register my spm image and am getting the following error:

 

developer@developer-VirtualBox:~$ kregister2 --s home --mov updated.mgz --regheader --reg register.dat --surf orig

kregister2: command not found

 

 

Is my path not set correctly?

 

Thanks again,

Rachel Wagner